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> Protein (NX_Q5BJE1)
Protein (NX_Q5BJE1)
Protein
Gene SymbolCCDC178 to neXtProt (NX_Q5BJE1)
DescriptionCoiled-coil domain-containing protein 178
Chromosome18
Location18q12.1 (30517366 ~ 31021065) to Ensembl
Sequene Features : Isoforms 4, Variants 46, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
4 46 0
2014-09-19transcript level
4 152 0
2014-05-27transcript level
4 152 0
2014-02-25transcript level
4 151 0
2013-12-09transcript level
4 130 0
2013-11-01transcript level
4 124 0
2013-09-12transcript level
3 124 0
2013-08-17transcript level
3 124 0
2013-07-15transcript level
3 80 0
2013-06-11transcript level
3 80 0
2013-02-12protein level
3 30 6
2012-12-20protein level
3 29 6
2012-10-30protein level
3 34 6
2012-10-07protein level
3 34 2
2012-08-24protein level
3 27 2
2012-07-28protein level
3 27 2
2012-06-08protein level
3 31 2
2012-05-07protein level
3 31 2
2012-04-10protein level
3 31 2
2012-01-13protein level
3 19 2
2011-12-20protein level
3 19 2
2011-11-11protein level
3 19 2
2011-08-23protein level
3 19 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5BJE1-1
0 45 0 101947.0251
NX_Q5BJE1-2
0 43 0 97504.3665
NX_Q5BJE1-3
1 41 0 95918.8838
NX_Q5BJE1-4
1 44 0 100099.2481
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain1
connective tissue40
testis39
Health State
TissuesTPM*
normal4
germ cell tumor3
soft tissue/muscle tissue tumor47
Developmental Stage
TissuesTPM*
adult3
fetus8
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.5
gallbladder3.1
kidney3.2
ovary5.1
prostate3.4
spleen7.1
testis13.5
thyroid gland2
urinary bladder2.6
Tissues
TissuesExpression level
adrenal glandMedium
appendixLow
bone marrowLow
breastLow
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Low
endometrium 2Low
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleLow
hippocampusMedium
kidneyMedium
lateral ventricleMedium
lungMedium
lymph nodeLow
nasopharynxMedium
oral mucosaLow
pancreasLow
parathyroid glandLow
placentaMedium
prostateLow
rectumMedium
salivary glandLow
skeletal muscleLow
skin 1Medium
skin 2Low
small intestineMedium
smooth muscleMedium
soft tissue 1Low
soft tissue 2Medium
stomach 1Medium
stomach 2Medium
testisMedium
thyroid glandMedium
tonsilLow
urinary bladderLow
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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