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> Protein (NX_Q5H9U9)
Protein (NX_Q5H9U9)
Protein
Gene SymbolDDX60L to neXtProt (NX_Q5H9U9)
DescriptionProbable ATP-dependent RNA helicase DDX60-like
Chromosome4
Location4q32.3 (169277886 ~ 169458937) to Ensembl
Sequene Features : Isoforms 2, Variants 205, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .ATP binding
.helicase activity
.RNA binding
.N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 205 0
2014-09-19protein level
2 149 0
2014-05-27protein level
2 149 0
2014-02-25protein level
2 148 0
2013-12-09protein level
2 97 0
2013-11-01protein level
2 97 0
2013-09-12protein level
2 97 0
2013-08-17protein level
2 97 0
2013-07-15protein level
2 67 0
2013-06-11protein level
2 67 0
2013-02-12protein level
2 29 0
2012-12-20protein level
2 26 0
2012-10-30protein level
2 41 0
2012-10-07protein level
2 41 0
2012-08-24protein level
2 36 0
2012-07-28protein level
2 36 0
2012-06-08protein level
2 42 0
2012-05-07protein level
2 42 0
2012-04-10protein level
2 42 0
2012-01-13protein level
2 25 0
2011-12-20protein level
2 25 0
2011-11-11protein level
2 25 0
2011-08-23transcript level
2 25 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5H9U9-1
20 63 5 197546.3385
NX_Q5H9U9-2
0 63 3 152155.3646
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
blood24
bone27
bone marrow20
brain3
connective tissue46
embryonic tissue4
eye9
intestine17
kidney9
liver24
lung29
lymph node22
mammary gland13
muscle47
pancreas18
placenta52
prostate5
stomach10
testis6
thymus12
thyroid21
trachea19
uterus12
Health State
TissuesTPM*
normal16
breast (mammary gland) tumor21
chondrosarcoma60
colorectal tumor17
gastrointestinal tumor8
germ cell tumor11
glioma9
head and neck tumor7
leukemia10
lung tumor9
lymphoma27
non-neoplasia41
pancreatic tumor38
prostate cancer9
soft tissue/muscle tissue tumor55
Developmental Stage
TissuesTPM*
adult29
fetus17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.6
adrenal gland4.8
appendix22.6
bone marrow28.3
cerebral cortex2.5
colon11.6
duodenum11.8
esophagus5.1
gallbladder13
heart muscle4.3
kidney2.9
liver5.1
lung11.8
lymph node13.4
ovary6.7
pancreas1.6
placenta19
prostate4.9
salivary gland9.5
skin4.9
small intestine12.6
spleen17.7
stomach16.9
testis4.4
thyroid gland4.7
urinary bladder10.5
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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