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> Protein (NX_Q5KU26)
Protein (NX_Q5KU26)
Protein
Gene SymbolCOLEC12 to neXtProt (NX_Q5KU26)
DescriptionCollectin-12
Chromosome18
Location18p11.32 (319361 ~ 500722) to Ensembl
Sequene Features : Isoforms 1, Variants 144, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.cellular response to exogenous dsRNA
.positive regulation of cell adhesion molecule production
.protein homooligomerization
  + 6 more...
.metal ion binding
.low-density lipoprotein particle binding
.signaling pattern recognition receptor activity
  + 2 more...
.extracellular exosome
.endocytic vesicle membrane
.integral component of membrane
  + 2 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 144 7
2014-09-19protein level
1 113 7
2014-05-27protein level
1 112 7
2014-02-25protein level
1 113 7
2013-12-09protein level
1 97 7
2013-11-01protein level
1 92 7
2013-09-12protein level
1 92 11
2013-08-17protein level
1 92 11
2013-07-15protein level
1 65 11
2013-06-11protein level
1 65 11
2013-02-12protein level
1 32 11
2012-12-20protein level
1 31 11
2012-10-30protein level
1 39 11
2012-10-07protein level
1 39 11
2012-08-24protein level
1 29 11
2012-07-28protein level
1 29 11
2012-06-08protein level
1 35 11
2012-05-07protein level
1 35 11
2012-04-10protein level
1 35 11
2012-01-13protein level
2 10 11
2011-12-20protein level
2 10 11
2011-11-11protein level
2 10 11
2011-08-23protein level
2 10 11
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5KU26-1
33 0 0 81464.4331
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone83
brain9
connective tissue40
ear496
embryonic tissue75
eye43
heart44
intestine4
kidney9
lung32
mouth15
pancreas4
placenta113
prostate15
salivary gland49
skin9
stomach20
testis4
thymus12
uterus4
vascular38
Health State
TissuesTPM*
normal25
chondrosarcoma72
colorectal tumor8
gastrointestinal tumor16
germ cell tumor11
glioma9
head and neck tumor14
kidney tumor29
lung tumor9
lymphoma13
non-neoplasia31
pancreatic tumor9
prostate cancer28
soft tissue/muscle tissue tumor7
Developmental Stage
TissuesTPM*
adult35
embryoid body171
blastocyst32
fetus28
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue32.6
adrenal gland7.2
appendix16.5
cerebral cortex12
colon10.4
duodenum6.3
esophagus11.6
gallbladder24.4
heart muscle9.9
kidney4
lung36.3
lymph node7.8
ovary6
pancreas1.4
placenta94
prostate16.7
salivary gland5.1
skin4.5
small intestine8.5
stomach8.8
testis8
thyroid gland4.5
urinary bladder21.4
Tissues
TissuesExpression level
cerebral cortexMedium
liverLow
lungLow
placentaHigh
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607621, gene) Collectin 12; COLEC12OMIM


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