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> Protein (NX_Q5SZJ8)
Protein (NX_Q5SZJ8)
Protein
Gene SymbolBEND6 to neXtProt (NX_Q5SZJ8)
DescriptionBEN domain-containing protein 6
Chromosome6
Location6p12.1 (56819773 ~ 56892140) to Ensembl
Sequene Features : Isoforms 4, Variants 36, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.negative regulation of Notch signaling pathway
.positive regulation of neuron differentiation
.chromatin binding
.RNA polymerase II transcription corepressor activity
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
4 36 0
2014-09-19transcript level
4 26 0
2014-05-27transcript level
4 26 0
2014-02-25transcript level
4 26 0
2013-12-09transcript level
4 21 0
2013-11-01transcript level
4 20 0
2013-09-12transcript level
4 20 0
2013-08-17transcript level
4 20 0
2013-07-15transcript level
4 14 0
2013-06-11transcript level
4 14 0
2013-02-12transcript level
4 4 0
2012-12-20transcript level
4 4 0
2012-10-30transcript level
4 5 0
2012-10-07transcript level
4 5 0
2012-08-24transcript level
4 3 0
2012-07-28transcript level
4 3 0
2012-06-08transcript level
4 3 0
2012-05-07transcript level
4 1 0
2012-04-10transcript level
4 1 0
2012-01-13transcript level
4 1 0
2011-12-20transcript level
4 1 0
2011-11-11transcript level
4 1 0
2011-08-23transcript level
4 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5SZJ8-1
0 10 0 31202.4359
NX_Q5SZJ8-2
1 3 0 12142.0393
NX_Q5SZJ8-3
1 6 0 20062.8895
NX_Q5SZJ8-4
1 6 0 21008.2747
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
bone13
brain26
kidney14
lung8
mouth30
pancreas4
prostate5
skin4
uterus8
Health State
TissuesTPM*
normal12
adrenal tumor79
germ cell tumor3
glioma18
head and neck tumor14
kidney tumor43
leukemia148
non-neoplasia41
pancreatic tumor9
skin tumor7
Developmental Stage
TissuesTPM*
adult7
fetus21
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland2
appendix1.8
cerebral cortex21.1
colon1.2
esophagus1.3
gallbladder4
ovary1.8
placenta1.6
prostate2
urinary bladder3.4
Tissues
TissuesExpression level
adrenal glandMedium
appendixMedium
bone marrowLow
breastMedium
bronchusMedium
cerebellumHigh
cerebral cortexHigh
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Medium
epididymisHigh
esophagusMedium
fallopian tubeHigh
gallbladderMedium
heart muscleLow
hippocampusMedium
kidneyMedium
lateral ventricleHigh
liverMedium
lungMedium
lymph nodeMedium
nasopharynxHigh
oral mucosaMedium
ovaryLow
pancreasMedium
parathyroid glandLow
placentaMedium
prostateMedium
rectumMedium
salivary glandMedium
seminal vesicleMedium
skin 1Medium
skin 2Medium
small intestineMedium
smooth muscleMedium
soft tissue 1Medium
soft tissue 2Medium
spleenLow
stomach 1Medium
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilMedium
urinary bladderHigh
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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