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> Protein (NX_Q5T3I0)
Protein (NX_Q5T3I0)
Protein
Gene SymbolGPATCH4 to neXtProt (NX_Q5T3I0)
DescriptionG patch domain-containing protein 4
Chromosome1
Location1q23.1 (156564279 ~ 156571288) to Ensembl
Sequene Features : Isoforms 3, Variants 15, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .poly(A) RNA binding .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 15 7
2014-09-19protein level
3 11 7
2014-05-27protein level
3 11 7
2014-02-25protein level
3 11 7
2013-12-09protein level
3 10 7
2013-11-01protein level
3 10 7
2013-09-12protein level
3 10 7
2013-08-17protein level
3 10 7
2013-07-15protein level
3 8 6
2013-06-11protein level
3 8 6
2013-02-12protein level
3 8 12
2012-12-20protein level
3 9 12
2012-10-30protein level
3 9 12
2012-10-07protein level
3 9 7
2012-08-24protein level
3 7 7
2012-07-28protein level
3 7 7
2012-06-08protein level
3 0 7
2012-05-07protein level
3 0 7
2012-04-10protein level
3 0 7
2012-01-13protein level
3 0 7
2011-12-20protein level
3 0 7
2011-11-11protein level
3 0 7
2011-08-23protein level
3 0 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5T3I0-1
1 22 0 50350.6962
NX_Q5T3I0-2
3 3 0 15867.9683
NX_Q5T3I0-3
1 22 0 50896.9134
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2372076,EBI-749265 CCDC155  
  .chromosome localization to nuclear envelope involved in homologous chromosome segregation
.oogenesis
.spermatogenesis
  + 2 more...
.N/A .integral component of membrane
.nuclear outer membrane
.lateral element
.chromosome, telomeric region
2 EBI-2372076,EBI-739624 CEP70  
  .organelle organization
.mitotic cell cycle
.G2/M transition of mitotic cell cycle
.N/A .nuclear membrane
.cytosol
.centrosome
  + 2 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites150
bladder33
blood81
bone41
bone marrow164
brain30
cervix41
connective tissue60
embryonic tissue70
eye71
heart55
intestine81
kidney52
larynx85
liver48
lung89
lymph225
mammary gland92
mouth90
ovary197
pancreas28
pharynx49
pituitary gland121
placenta14
prostate131
skin28
spleen112
stomach31
testis20
thymus37
thyroid21
umbilical cord145
uterus51
vascular154
Health State
TissuesTPM*
normal50
adrenal tumor79
breast (mammary gland) tumor107
cervical tumor28
chondrosarcoma96
colorectal tumor62
gastrointestinal tumor84
germ cell tumor34
glioma37
head and neck tumor52
kidney tumor43
leukemia127
liver tumor52
lung tumor97
lymphoma138
non-neoplasia31
ovarian tumor262
primitive neuroectodermal tumor of the CNS78
prostate cancer182
retinoblastoma86
skin tumor23
soft tissue/muscle tissue tumor31
uterine tumor77
Developmental Stage
TissuesTPM*
adult8
embryoid body28
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue20.8
adrenal gland20
appendix25.1
bone marrow11
cerebral cortex23.8
colon18.8
duodenum13.7
esophagus17.3
gallbladder12.2
heart muscle13.8
kidney16.4
liver13.6
lung13
lymph node23
ovary14.8
pancreas8.4
placenta12.8
prostate18.8
salivary gland12
skin15.5
small intestine11.6
spleen15.8
stomach16
testis18.1
thyroid gland15.2
urinary bladder16.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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