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> Protein (NX_Q5T481)
Protein (NX_Q5T481)
Protein
Gene SymbolRBM20 to neXtProt (NX_Q5T481)
DescriptionRNA-binding protein 20
Chromosome10
Location10q25.2 (112404155 ~ 112599227) to Ensembl
Sequene Features : Isoforms 1, Variants 81, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of RNA splicing
.RNA splicing
.heart development
.mRNA processing
.zinc ion binding
.RNA binding
.nucleotide binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 81 7
2014-09-19protein level
1 70 7
2014-05-27protein level
1 70 9
2014-02-25protein level
1 67 9
2013-12-09protein level
1 50 9
2013-11-01protein level
1 50 9
2013-09-12protein level
1 50 9
2013-08-17protein level
1 50 9
2013-07-15protein level
1 38 9
2013-06-11protein level
1 38 9
2013-02-12protein level
1 27 3
2012-12-20protein level
1 32 3
2012-10-30protein level
1 33 3
2012-10-07protein level
1 29 3
2012-08-24protein level
1 26 3
2012-07-28protein level
1 26 3
2012-06-08protein level
1 27 3
2012-05-07protein level
1 26 3
2012-04-10protein level
1 26 3
2012-01-13protein level
1 20 3
2011-12-20protein level
1 20 3
2011-11-11protein level
1 20 2
2011-08-23protein level
1 20 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5T481-1
50 0 0 134273.3739
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone13
brain2
eye9
intestine12
lung2
mouth30
muscle9
parathyroid97
skin4
testis4
uterus8
Health State
TissuesTPM*
normal1
chondrosarcoma12
gastrointestinal tumor8
head and neck tumor14
ovarian tumor26
primitive neuroectodermal tumor of the CNS7
skin tumor7
uterine tumor11
Developmental Stage
TissuesTPM*
adult3
fetus3
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
esophagus6.1
heart muscle31.9
ovary6.4
pancreas9.2
placenta3
prostate1.1
salivary gland14.2
testis1.1
thyroid gland1.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*613171, gene) Rna-binding motif protein 20; RBM20OMIM
2(#613172, phenotype) Cardiomyopathy, dilated, 1dd; CMD1DDOMIM


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