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> Protein (NX_Q5VSY0)
Protein (NX_Q5VSY0)
Protein
Gene SymbolGKAP1 to neXtProt (NX_Q5VSY0)
DescriptionG kinase-anchoring protein 1
Chromosome9
Location9q21.32 (86354336 ~ 86444431) to Ensembl
Sequene Features : Isoforms 2, Variants 33, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.signal transduction .N/A .Golgi apparatus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 33 2
2014-09-19protein level
2 23 2
2014-05-27protein level
2 23 2
2014-02-25protein level
2 23 2
2013-12-09protein level
2 19 2
2013-11-01protein level
2 18 2
2013-09-12protein level
2 18 4
2013-08-17protein level
2 18 4
2013-07-15protein level
2 14 4
2013-06-11protein level
2 14 4
2013-02-12protein level
2 6 8
2012-12-20protein level
2 6 8
2012-10-30protein level
2 6 8
2012-10-07protein level
2 6 4
2012-08-24protein level
2 5 4
2012-07-28protein level
2 5 4
2012-06-08protein level
2 6 4
2012-05-07protein level
2 6 4
2012-04-10protein level
2 6 4
2012-01-13protein level
2 5 4
2011-12-20protein level
2 5 4
2011-11-11protein level
2 5 4
2011-08-23protein level
2 5 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5VSY0-1
2 15 0 42052.465
NX_Q5VSY0-2
0 15 0 36103.6546
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-743722,EBI-1048159 MFAP1  
  .extracellular matrix organization .poly(A) RNA binding .extracellular region
.microfibril
2 EBI-743722,EBI-750003 HDDC3  
  .N/A .metal ion binding
.guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
.N/A
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain8
connective tissue93
embryonic tissue4
heart11
kidney4
lung17
lymph node77
mammary gland6
muscle65
ovary9
parathyroid145
prostate10
skin4
testis186
thyroid42
uterus21
Health State
TissuesTPM*
normal25
breast (mammary gland) tumor10
germ cell tumor11
leukemia10
non-neoplasia20
ovarian tumor13
prostate cancer9
skin tumor7
soft tissue/muscle tissue tumor111
uterine tumor11
Developmental Stage
TissuesTPM*
adult18
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6.7
adrenal gland7.3
appendix3.7
bone marrow3.5
cerebral cortex8.2
colon4
duodenum4.9
esophagus4.6
gallbladder6.1
heart muscle11.4
kidney6.3
liver5.2
lung4.8
lymph node4.5
ovary11.6
pancreas4.3
placenta2.5
prostate8.8
salivary gland4.3
skin2.6
small intestine4.2
spleen3.6
stomach4.1
testis166.2
thyroid gland10.3
urinary bladder5
Tissues
TissuesExpression level
adrenal glandMedium
appendixLow
bone marrowLow
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineLow
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Low
epididymisMedium
esophagusMedium
fallopian tubeMedium
gallbladderMedium
heart muscleLow
hippocampusMedium
kidneyMedium
lateral ventricleMedium
liverMedium
lungLow
lymph nodeLow
nasopharynxMedium
oral mucosaLow
pancreasMedium
parathyroid glandMedium
placentaMedium
prostateMedium
rectumLow
salivary glandLow
seminal vesicleMedium
skeletal muscleLow
skin 1Low
skin 2Low
small intestineMedium
soft tissue 1Low
stomach 1Medium
stomach 2Medium
testisHigh
thyroid glandMedium
tonsilMedium
urinary bladderLow
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*611356, gene) G kinase-anchoring protein 1; GKAP1OMIM


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