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> Protein (NX_Q5VYK3)
Protein (NX_Q5VYK3)
Protein
Gene SymbolECM29 to neXtProt (NX_Q5VYK3)
DescriptionProteasome-associated protein ECM29 homolog
Chromosome9
Location9q31.3 (114122972 ~ 114247025) to Ensembl
Sequene Features : Isoforms 1, Variants 1, PTMs 14 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.ER-associated ubiquitin-dependent protein catabolic process .N/A .endocytic vesicle
.ER to Golgi transport vesicle
.cytoplasmic membrane-bounded vesicle
  + 9 more...
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 1 14
2014-09-19protein level
1 1 14
2014-05-27protein level
1 1 14
2014-02-25protein level
1 1 14
2013-12-09protein level
1 1 14
2013-11-01protein level
1 1 9
2013-09-12protein level
1 1 8
2013-08-17protein level
1 1 8
2013-07-15protein level
1 1 4
2013-06-11protein level
1 1 4
2013-02-12protein level
1 1 4
2012-12-20protein level
1 1 4
2012-10-30protein level
1 1 4
2012-10-07protein level
1 1 4
2012-08-24protein level
1 1 4
2012-07-28protein level
1 1 4
2012-06-08protein level
1 2 4
2012-05-07protein level
1 2 4
2012-04-10protein level
1 2 4
2012-01-13protein level
1 2 4
2011-12-20protein level
1 2 4
2011-11-11protein level
1 2 3
2011-08-23protein level
1 2 3
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5VYK3-1
89 0 0 204159.8043
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-521451,EBI-741181 AGTRAP  
  .regulation of blood pressure
.response to hypoxia
.angiotensin type II receptor activity .intracellular membrane-bounded organelle
.cytoplasmic vesicle membrane
.integral component of membrane
  + 6 more...
2 EBI-521451,EBI-2548702 CMTM5  
  .negative regulation of myoblast differentiation
.chemotaxis
.N/A .integral component of membrane
.extracellular space
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue155
adrenal gland30
blood24
bone97
bone marrow20
brain108
cervix61
connective tissue40
ear124
embryonic tissue126
esophagus49
eye57
heart33
intestine133
kidney56
larynx42
liver24
lung29
lymph135
lymph node44
mammary gland152
mouth90
muscle56
nerve64
ovary29
pancreas28
parathyroid48
pituitary gland60
placenta24
prostate63
skin52
stomach198
testis107
thyroid42
tonsil58
trachea135
umbilical cord145
uterus60
vascular19
Health State
TissuesTPM*
normal78
adrenal tumor79
breast (mammary gland) tumor128
cervical tumor86
chondrosarcoma84
colorectal tumor151
esophageal tumor57
gastrointestinal tumor92
germ cell tumor121
glioma74
head and neck tumor74
kidney tumor29
leukemia31
liver tumor31
lymphoma83
non-neoplasia41
ovarian tumor13
pancreatic tumor28
primitive neuroectodermal tumor of the CNS55
prostate cancer67
retinoblastoma150
skin tumor63
soft tissue/muscle tissue tumor79
uterine tumor33
Developmental Stage
TissuesTPM*
adult80
embryoid body114
blastocyst195
neonate64
fetus75
infant85
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue45.8
adrenal gland38.3
appendix38.5
bone marrow25.7
cerebral cortex36.8
colon39.5
duodenum43.8
esophagus38
gallbladder33.3
heart muscle33.4
kidney37
liver20.3
lung31.7
lymph node30.7
ovary43.6
pancreas18.8
placenta31.7
prostate43
salivary gland29.1
skin32.9
small intestine41.3
spleen28
stomach41.2
testis52.3
thyroid gland50.7
urinary bladder38.1
Tissues
TissuesExpression level
adrenal glandLow
appendixLow
breastLow
bronchusMedium
colonHigh
duodenumMedium
endometrium 1Medium
endometrium 2Medium
epididymisHigh
fallopian tubeMedium
gallbladderMedium
kidneyMedium
liverMedium
lungMedium
nasopharynxLow
oral mucosaLow
ovaryMedium
pancreasHigh
prostateLow
salivary glandLow
seminal vesicleMedium
skin 1High
small intestineLow
soft tissue 1Medium
soft tissue 2Medium
stomach 1High
stomach 2High
testisHigh
thyroid glandMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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