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> Protein (NX_Q5VYV7)
Protein (NX_Q5VYV7)
Protein
Gene SymbolSLX4IP to neXtProt (NX_Q5VYV7)
DescriptionProtein SLX4IP
Chromosome20
Location20p12.2 (10415951 ~ 10617477) to Ensembl
Sequene Features : Isoforms 1, Variants 16, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 16 0
2014-09-19protein level
1 35 0
2014-05-27protein level
1 35 0
2014-02-25protein level
1 34 0
2013-12-09protein level
1 25 0
2013-11-01protein level
1 23 0
2013-09-12protein level
1 23 0
2013-08-17protein level
1 23 0
2013-07-15protein level
1 20 0
2013-06-11protein level
1 20 0
2013-02-12protein level
1 9 1
2012-12-20protein level
1 9 1
2012-10-30protein level
1 9 1
2012-10-07protein level
1 9 1
2012-08-24protein level
1 9 1
2012-07-28protein level
1 9 1
2012-06-08protein level
1 9 1
2012-05-07protein level
1 7 1
2012-04-10protein level
1 7 1
2012-01-13protein level
1 5 1
2011-12-20protein level
1 5 1
2011-11-11protein level
1 5 1
2011-08-23protein level
1 5 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5VYV7-1
20 0 0 45523.3802
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2370881,EBI-2370740 SLX4  
  .response to intra-S DNA damage checkpoint signaling
.positive regulation of catalytic activity
.DNA double-strand break processing involved in repair via single-strand annealing
  + 4 more...
.5'-flap endonuclease activity
.enzyme activator activity
.Slx1-Slx4 complex
.cell junction
.cytoplasm
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain1
intestine8
kidney4
liver9
pancreas9
prostate21
thymus12
uterus4
Health State
TissuesTPM*
normal1
colorectal tumor17
glioma9
leukemia21
liver tumor20
prostate cancer28
uterine tumor11
Developmental Stage
TissuesTPM*
adult4
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue1
adrenal gland1.7
appendix1.4
bone marrow1
cerebral cortex2.1
colon1.8
duodenum1.2
esophagus1.4
gallbladder1.6
kidney2.3
lung1.3
lymph node1.6
ovary1.1
placenta1.6
skin1.3
small intestine1.4
spleen1.6
stomach1.9
testis1.9
thyroid gland2.2
urinary bladder2.4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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