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> Protein (NX_Q5W0B1)
Protein (NX_Q5W0B1)
Protein
Gene SymbolRNF219 to neXtProt (NX_Q5W0B1)
DescriptionRING finger protein 219
Chromosome13
Location13q31.1 (79188426 ~ 79233314) to Ensembl
Sequene Features : Isoforms 1, Variants 96, PTMs 10 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of mRNA splicing, via spliceosome .zinc ion binding .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 96 10
2014-09-19protein level
1 75 10
2014-05-27protein level
1 75 10
2014-02-25protein level
1 76 10
2013-12-09protein level
1 59 10
2013-11-01protein level
1 59 10
2013-09-12protein level
1 59 10
2013-08-17protein level
1 59 10
2013-07-15protein level
1 31 8
2013-06-11protein level
1 31 8
2013-02-12protein level
1 16 10
2012-12-20protein level
1 16 10
2012-10-30protein level
1 20 10
2012-10-07protein level
1 20 10
2012-08-24protein level
1 14 10
2012-07-28protein level
1 14 10
2012-06-08protein level
1 17 10
2012-05-07protein level
1 17 10
2012-04-10protein level
1 17 10
2012-01-13protein level
1 8 10
2011-12-20protein level
1 8 10
2011-11-11protein level
1 8 9
2011-08-23protein level
1 8 9
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q5W0B1-1
34 0 0 81065.4878
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2562035,EBI-954696 TCEANC  
  .regulation of DNA-templated transcription, elongation
.regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated
.DNA binding .nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
blood8
brain45
connective tissue13
embryonic tissue42
esophagus49
eye19
heart55
kidney14
liver29
lung11
lymph node122
mammary gland26
mouth90
muscle28
ovary9
pancreas14
pharynx24
pituitary gland60
placenta17
prostate10
skin14
testis73
thymus12
thyroid21
trachea96
uterus21
vascular19
Health State
TissuesTPM*
normal37
breast (mammary gland) tumor21
chondrosarcoma12
esophageal tumor57
germ cell tumor26
head and neck tumor44
liver tumor62
non-neoplasia10
primitive neuroectodermal tumor of the CNS31
prostate cancer9
retinoblastoma43
skin tumor7
uterine tumor55
Developmental Stage
TissuesTPM*
adult11
embryoid body28
blastocyst65
neonate32
fetus53
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5
adrenal gland5.3
appendix6.9
bone marrow1.6
cerebral cortex7.4
colon5.2
duodenum4.7
esophagus5.4
gallbladder5.1
heart muscle5.6
kidney4.2
liver2.2
lung5.2
lymph node9.7
ovary7.3
pancreas1.9
placenta6.3
prostate5.3
salivary gland3.2
skin4.7
small intestine4.4
spleen6.6
stomach4.2
testis15.3
thyroid gland5.8
urinary bladder7
Tissues
TissuesExpression level
adrenal glandMedium
appendixMedium
bone marrowLow
breastLow
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineMedium
colonMedium
duodenumMedium
endometrium 1Medium
endometrium 2Low
epididymisMedium
fallopian tubeMedium
gallbladderMedium
heart muscleMedium
hippocampusMedium
kidneyMedium
lateral ventricleLow
liverMedium
lungMedium
lymph nodeLow
nasopharynxMedium
pancreasMedium
parathyroid glandMedium
placentaMedium
prostateLow
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 1Medium
skin 2Medium
small intestineMedium
soft tissue 1Medium
soft tissue 2Medium
stomach 1Medium
stomach 2Medium
testisMedium
thyroid glandMedium
tonsilLow
urinary bladderMedium
vaginaLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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