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> Protein (NX_Q69YG0)
Protein (NX_Q69YG0)
Protein
Gene SymbolTMEM42 to neXtProt (NX_Q69YG0)
DescriptionTransmembrane protein 42
Chromosome3
Location3p21.31 (44903361 ~ 44907162) to Ensembl
Sequene Features : Isoforms 1, Variants 20, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 20 0
2014-09-19transcript level
1 18 0
2014-05-27transcript level
1 18 0
2014-02-25transcript level
1 18 0
2013-12-09transcript level
1 13 0
2013-11-01transcript level
1 13 0
2013-09-12transcript level
1 13 0
2013-08-17transcript level
1 13 0
2013-07-15transcript level
1 10 0
2013-06-11transcript level
1 10 0
2013-02-12transcript level
1 5 0
2012-12-20transcript level
1 5 0
2012-10-30transcript level
1 5 0
2012-10-07transcript level
1 5 0
2012-08-24transcript level
1 5 0
2012-07-28transcript level
1 5 0
2012-06-08transcript level
1 6 0
2012-05-07transcript level
1 3 0
2012-04-10transcript level
1 3 0
2012-01-13transcript level
1 1 0
2011-12-20transcript level
1 1 0
2011-11-11transcript level
1 1 0
2011-08-23transcript level
1 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q69YG0-1
5 0 0 16979.55
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
blood16
bone41
brain12
cervix20
connective tissue13
ear124
embryonic tissue14
eye19
intestine12
kidney14
liver14
lung32
lymph node22
mammary gland19
muscle18
nerve64
ovary19
pancreas42
parathyroid48
pituitary gland60
placenta3
prostate10
salivary gland49
testis11
thyroid42
uterus25
vascular19
Health State
TissuesTPM*
normal18
breast (mammary gland) tumor32
cervical tumor28
chondrosarcoma48
colorectal tumor26
gastrointestinal tumor8
germ cell tumor3
glioma27
head and neck tumor14
kidney tumor14
leukemia10
liver tumor10
lung tumor9
ovarian tumor26
pancreatic tumor19
primitive neuroectodermal tumor of the CNS39
retinoblastoma21
soft tissue/muscle tissue tumor7
uterine tumor44
Developmental Stage
TissuesTPM*
adult21
blastocyst16
fetus32
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9
adrenal gland12.4
appendix6.2
bone marrow3
cerebral cortex9.6
colon7.3
duodenum5.2
esophagus5.7
gallbladder7.5
heart muscle7.1
kidney10.1
liver7.9
lung8.7
lymph node11
ovary14.6
pancreas6.2
placenta6.9
prostate12.4
salivary gland7.7
skin8.2
small intestine5.5
spleen9.8
stomach8.5
testis16.1
thyroid gland13.9
urinary bladder7.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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