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> Protein (NX_Q6DKI2)
Protein (NX_Q6DKI2)
Protein
Gene SymbolLGALS9C to neXtProt (NX_Q6DKI2)
DescriptionGalectin-9C
Chromosome17
Location17p11.2 (18380051 ~ 18398259) to Ensembl
Sequene Features : Isoforms 1, Variants 36, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .carbohydrate binding .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 36 0
2014-09-19transcript level
1 31 0
2014-05-27transcript level
1 31 0
2014-02-25transcript level
1 31 0
2013-12-09transcript level
1 30 0
2013-11-01transcript level
1 30 0
2013-09-12transcript level
1 30 0
2013-08-17transcript level
1 30 0
2013-07-15transcript level
1 23 0
2013-06-11transcript level
1 23 0
2013-02-12transcript level
1 19 0
2012-12-20transcript level
1 18 0
2012-10-30transcript level
1 16 0
2012-10-07transcript level
1 16 0
2012-08-24transcript level
1 14 0
2012-07-28transcript level
1 14 0
2012-06-08transcript level
1 18 0
2012-05-07transcript level
1 17 0
2012-04-10transcript level
1 17 0
2012-01-13transcript level
1 9 0
2011-12-20transcript level
1 9 0
2011-11-11transcript level
1 9 0
2011-08-23transcript level
1 9 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q6DKI2-1
3 0 13 39581.638
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-9088829,EBI-740019 PLSCR1  
  .positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
.regulation of Fc receptor mediated stimulatory signaling pathway
.defense response to virus
  + 11 more...
.CD4 receptor binding
.enzyme binding
.phospholipid scramblase activity
  + 5 more...
.extracellular exosome
.membrane raft
.extracellular matrix
  + 7 more...
2 EBI-9088829,EBI-7875264 DAB1  
  .lateral motor column neuron migration
.Golgi localization
.negative regulation of axonogenesis
  + 15 more...
.N/A .perinuclear region of cytoplasm
.apical part of cell
.neuronal cell body
  + 5 more...
3 EBI-9088829,EBI-740322 RBPMS  
  .positive regulation of SMAD protein import into nucleus
.positive regulation of pathway-restricted SMAD protein phosphorylation
.RNA processing
  + 2 more...
.poly(A) RNA binding
.poly(A) binding
.transcription coactivator activity
.nucleotide binding
.cytoplasm
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood16
esophagus49
eye9
intestine60
lung5
mammary gland6
skin4
stomach10
Health State
TissuesTPM*
normal5
breast (mammary gland) tumor10
colorectal tumor8
germ cell tumor3
leukemia21
lung tumor19
non-neoplasia20
Developmental Stage
TissuesTPM*
adult4
fetus1
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
appendix1.4
bone marrow1.3
colon13.5
duodenum4.4
esophagus8.8
gallbladder23.9
lung1.3
lymph node1.3
small intestine10.4
spleen1.7
stomach45.6
Tissues
TissuesExpression level
appendixMedium
bone marrowLow
breastLow
bronchusLow
cervix, uterineLow
colonHigh
duodenumLow
endometrium 2Medium
fallopian tubeMedium
gallbladderMedium
heart muscleLow
liverLow
lungLow
lymph nodeMedium
pancreasMedium
rectumHigh
skeletal muscleLow
smooth muscleMedium
spleenLow
stomach 1High
stomach 2Medium
tonsilMedium
urinary bladderLow
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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