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> Protein (NX_Q6NXP0)
Protein (NX_Q6NXP0)
Protein
Gene SymbolEFCAB12 to neXtProt (NX_Q6NXP0)
DescriptionEF-hand calcium-binding domain-containing protein 12
Chromosome3
Location3q21.3 (129120164 ~ 129147494) to Ensembl
Sequene Features : Isoforms 1, Variants 35, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .calcium ion binding .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 35 0
2014-09-19transcript level
1 62 0
2014-05-27transcript level
1 62 0
2014-02-25transcript level
1 62 0
2013-12-09transcript level
1 47 0
2013-11-01transcript level
1 47 0
2013-09-12transcript level
1 47 0
2013-08-17transcript level
1 47 0
2013-07-15transcript level
1 35 0
2013-06-11transcript level
1 35 0
2013-02-12transcript level
1 25 0
2012-12-20transcript level
1 28 0
2012-10-30transcript level
1 32 0
2012-10-07transcript level
1 32 0
2012-08-24transcript level
1 27 0
2012-07-28transcript level
1 27 0
2012-06-08transcript level
1 27 0
2012-05-07transcript level
1 27 0
2012-04-10transcript level
1 27 0
2012-01-13transcript level
1 19 0
2011-12-20transcript level
1 19 0
2011-11-11transcript level
1 19 0
2011-08-23transcript level
1 19 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q6NXP0-1
26 0 0 66508.2861
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10251535,EBI-741101 FHL3  
  .actin cytoskeleton organization
.muscle organ development
.zinc ion binding .Z disc
.focal adhesion
.nucleus
.stress fiber
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain11
embryonic tissue4
eye14
liver4
lung8
mammary gland6
mouth15
pancreas9
prostate10
testis27
thymus12
trachea38
uterus4
Health State
TissuesTPM*
normal9
breast (mammary gland) tumor10
head and neck tumor7
pancreatic tumor9
uterine tumor11
Developmental Stage
TissuesTPM*
adult5
embryoid body14
fetus5
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
liver1.2
lung2.8
ovary1.4
prostate6.5
testis6.5
thyroid gland1.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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