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> Protein (NX_Q6PDB4)
Protein (NX_Q6PDB4)
Protein
Gene SymbolZNF880 to neXtProt (NX_Q6PDB4)
DescriptionZinc finger protein 880
Chromosome19
Location19q13.41 (52873170 ~ 52889048) to Ensembl
Sequene Features : Isoforms 2, Variants 72, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated .metal ion binding
.sequence-specific DNA binding transcription factor activity
.nucleic acid binding
.intracellular
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 72 0
2014-09-19transcript level
2 54 0
2014-05-27transcript level
2 54 0
2014-02-25transcript level
2 54 0
2013-12-09transcript level
2 44 0
2013-11-01transcript level
2 44 0
2013-09-12transcript level
2 44 0
2013-08-17transcript level
2 44 0
2013-07-15transcript level
2 27 0
2013-06-11transcript level
2 27 0
2013-02-12transcript level
2 18 0
2012-12-20transcript level
2 18 0
2012-10-30transcript level
2 23 0
2012-10-07transcript level
2 23 0
2012-08-24transcript level
2 22 0
2012-07-28transcript level
2 20 0
2012-06-08transcript level
2 20 0
2012-05-07transcript level
2 19 0
2012-04-10transcript level
2 19 0
2012-01-13transcript level
2 22 0
2011-12-20transcript level
2 22 0
2011-11-11transcript level
2 22 0
2011-08-23transcript level
2 22 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q6PDB4-1
18 3 9 66719.0444
NX_Q6PDB4-2
1 3 0 11239.7123
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
bladder33
blood8
bone marrow41
brain10
embryonic tissue4
esophagus49
eye9
heart33
kidney18
mammary gland6
muscle56
ovary9
pancreas4
parathyroid97
pharynx98
placenta3
prostate26
skin14
spleen18
testis13
thymus12
thyroid21
trachea19
uterus4
vascular19
Health State
TissuesTPM*
normal14
bladder carcinoma56
esophageal tumor57
germ cell tumor11
head and neck tumor7
kidney tumor14
leukemia10
ovarian tumor13
primitive neuroectodermal tumor of the CNS15
prostate cancer9
skin tumor7
Developmental Stage
TissuesTPM*
adult9
fetus7
infant85
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6.1
adrenal gland8.4
appendix10.6
bone marrow8.3
cerebral cortex6.9
colon5.9
duodenum4.1
esophagus4.7
gallbladder10.3
heart muscle11
kidney6.2
liver1.3
lung8.2
lymph node12.6
ovary14
pancreas3.1
placenta6.7
prostate13
salivary gland6.8
skin6.8
small intestine5.8
spleen10.4
stomach5.7
testis8.1
thyroid gland16.3
urinary bladder11.8
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)


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