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> Protein (NX_Q6UW56)
Protein (NX_Q6UW56)
Protein
Gene SymbolATRAID to neXtProt (NX_Q6UW56)
DescriptionAll-trans retinoic acid-induced differentiation factor
Chromosome2
Location2p23.3 (27434895 ~ 27440046) to Ensembl
Sequene Features : Isoforms 3, Variants 17, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.negative regulation of cyclin catabolic process
.positive regulation of osteoblast differentiation
.negative regulation of osteoblast proliferation
  + 3 more...
.N/A .perinuclear region of cytoplasm
.integral component of membrane
.plasma membrane
.nuclear envelope
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 17 7
2014-09-19protein level
3 26 7
2014-05-27protein level
3 26 7
2014-02-25protein level
3 26 7
2013-12-09protein level
3 18 7
2013-11-01protein level
3 17 7
2013-09-12protein level
3 17 7
2013-08-17protein level
3 17 7
2013-07-15protein level
3 13 7
2013-06-11protein level
3 13 7
2013-02-12protein level
3 12 20
2012-12-20protein level
3 11 20
2012-10-30protein level
3 12 20
2012-10-07protein level
3 12 7
2012-08-24protein level
3 11 7
2012-07-28protein level
3 11 7
2012-06-08protein level
3 15 7
2012-05-07protein level
3 13 7
2012-04-10protein level
3 13 7
2012-01-13protein level
3 9 7
2011-12-20protein level
3 9 7
2011-11-11protein level
3 9 7
2011-08-23protein level
3 9 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q6UW56-1
0 7 0 24730.2016
NX_Q6UW56-2
0 5 0 18585.0162
NX_Q6UW56-3
2 7 0 30322.081
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-723802,EBI-947754 NELL1  
  .negative regulation of cyclin catabolic process
.positive regulation of osteoblast differentiation
.negative regulation of osteoblast proliferation
  + 4 more...
.calcium ion binding .perinuclear region of cytoplasm
.cytoplasm
.nuclear envelope
.extracellular region
2 EBI-723802,EBI-77848 SNX9  
  .membrane tubulation
.lipid tube assembly
.positive regulation of membrane protein ectodomain proteolysis
  + 11 more...
.Arp2/3 complex binding
.protein homodimerization activity
.phosphatidylinositol binding
  + 2 more...
.extracellular exosome
.extrinsic component of cytoplasmic side of plasma membrane
.cytoplasmic vesicle membrane
  + 7 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland91
ascites125
blood139
bone139
bone marrow102
brain38
cervix82
connective tissue53
ear124
embryonic tissue112
eye153
heart78
intestine64
kidney99
larynx42
liver19
lung113
lymph node44
mammary gland264
mouth15
muscle103
nerve128
ovary88
pancreas337
parathyroid291
pharynx122
pituitary gland423
placenta158
prostate121
salivary gland444
skin85
stomach62
testis27
thymus12
thyroid21
tonsil176
umbilical cord145
uterus77
vascular19
Health State
TissuesTPM*
normal79
adrenal tumor237
breast (mammary gland) tumor408
cervical tumor115
chondrosarcoma156
colorectal tumor62
gastrointestinal tumor101
germ cell tumor60
glioma158
head and neck tumor82
kidney tumor101
leukemia52
liver tumor31
lung tumor87
lymphoma83
non-neoplasia51
ovarian tumor26
pancreatic tumor523
primitive neuroectodermal tumor of the CNS125
prostate cancer125
retinoblastoma150
skin tumor87
soft tissue/muscle tissue tumor71
uterine tumor122
Developmental Stage
TissuesTPM*
adult112
embryoid body200
blastocyst48
neonate64
fetus57
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue83.5
adrenal gland92.2
appendix58.1
bone marrow53.4
cerebral cortex36.7
colon87.1
duodenum62.3
esophagus72.3
gallbladder93.5
heart muscle123
kidney103
liver33.4
lung77.2
lymph node73.1
ovary133.1
pancreas70.9
placenta94.1
prostate91.1
salivary gland95.2
skin58.6
small intestine63.2
spleen71.1
stomach76.6
testis105
thyroid gland139.1
urinary bladder96
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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