Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_Q7Z398)
Protein (NX_Q7Z398)
Protein
Gene SymbolZNF550 to neXtProt (NX_Q7Z398)
DescriptionZinc finger protein 550
Chromosome19
Location19q13.43 (58046625 ~ 58071231) to Ensembl
Sequene Features : Isoforms 2, Variants 52, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.metal ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 52 0
2014-09-19transcript level
2 1 0
2014-05-27transcript level
2 40 0
2014-02-25transcript level
2 25 0
2013-12-09transcript level
2 14 0
2013-11-01transcript level
2 14 0
2012-12-20protein level
2 14 2
2012-10-30protein level
2 18 2
2012-10-07protein level
2 18 1
2012-08-24protein level
2 17 1
2012-07-28protein level
2 17 1
2012-06-08protein level
2 18 1
2012-05-07protein level
2 18 1
2012-04-10protein level
2 18 1
2012-01-13protein level
2 11 1
2011-12-20protein level
2 11 1
2011-11-11protein level
2 11 1
2011-08-23protein level
2 11 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q7Z398-1
3 16 3 48349.9391
NX_Q7Z398-2
1 16 3 44758.0137
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10256834,EBI-307352 REL  
  .negative regulation of neuron death
.positive regulation of transcription from RNA polymerase II promoter
.innate immune response
  + 10 more...
.sequence-specific DNA binding transcription factor activity
.chromatin binding
.RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
.RNA polymerase II distal enhancer sequence-specific DNA binding
.I-kappaB/NF-kappaB complex
.cytosol
.transcription factor complex
  + 2 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
bone55
brain10
embryonic tissue18
eye33
intestine4
liver4
lung2
lymph node22
mammary gland13
mouth30
muscle18
ovary29
pancreas14
pituitary gland60
placenta10
prostate21
stomach10
testis18
thymus25
thyroid21
trachea38
uterus12
Health State
TissuesTPM*
normal13
breast (mammary gland) tumor21
chondrosarcoma36
germ cell tumor22
glioma9
head and neck tumor14
non-neoplasia10
ovarian tumor39
primitive neuroectodermal tumor of the CNS7
prostate cancer19
soft tissue/muscle tissue tumor7
Developmental Stage
TissuesTPM*
adult14
embryoid body14
blastocyst48
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2.9
adrenal gland4.3
appendix6.4
bone marrow3.7
cerebral cortex3.3
colon3.1
duodenum3.2
esophagus3.8
gallbladder3.7
heart muscle4.6
kidney4.1
liver2.2
lung4
lymph node9.9
ovary11.6
pancreas2.3
placenta7
prostate7.5
salivary gland4.2
skin5.2
small intestine3.6
spleen8.2
stomach3.8
testis3.8
thyroid gland6.3
urinary bladder6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center