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Protein |
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Gene Symbol | FAM19A1 to neXtProt (NX_Q7Z5A9) |
Description | Protein FAM19A1 |
Chromosome | 3 |
Location | 3p14.1 (68053359 ~ 68594776) to Ensembl |
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Sequene Features : Isoforms 1, Variants 35, PTMs 0 to neXtProt Sequence Features
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Gene Ontologies |
GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
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.N/A |
.N/A |
.endoplasmic reticulum .extracellular region |
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Proteomic Evidences |
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Release | | Protein Evidence | | Pr | | Ab | | Isoforms | | Variants | | PTMs |
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2015-01-01 | | transcript level | | | | | | | 1 |
| 35 |
| 0 |
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2014-09-19 | | transcript level | | | | | | | 1 |
| 21 |
| 0 |
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2014-05-27 | | transcript level | | | | | | | 1 |
| 21 |
| 0 |
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2014-02-25 | | transcript level | | | | | | | 1 |
| 20 |
| 0 |
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2013-12-09 | | transcript level | | | | | | | 1 |
| 20 |
| 0 |
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2013-11-01 | | transcript level | | | | | | | 1 |
| 20 |
| 0 |
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2013-09-12 | | transcript level | | | | | | | 1 |
| 20 |
| 0 |
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2013-08-17 | | transcript level | | | | | | | 1 |
| 20 |
| 0 |
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2013-07-15 | | transcript level | | | | | | | 1 |
| 11 |
| 0 |
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2013-06-11 | | transcript level | | | | | | | 1 |
| 11 |
| 0 |
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2013-02-12 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-12-20 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-10-30 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-10-07 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-08-24 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-07-28 | | transcript level | | | | | | | 1 |
| 1 |
| 0 |
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2012-06-08 | | transcript level | | | | | | | 1 |
| 2 |
| 0 |
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2012-05-07 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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2012-04-10 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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2012-01-13 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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2011-12-20 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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2011-11-11 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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2011-08-23 | | transcript level | | | | | | | 1 |
| 3 |
| 0 |
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Protein Isoforms |
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| : Uniquely mapped peptide | | : Gene-specific peptide | | : Shared peptide |
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Interacting Partners |
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No. |
Exp. ref. |
Symbol |
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PE |
Pr |
Ab |
Di |
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GO: Biological Process |
GO: Mulecular Function |
GO: Cellular Component |
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1 |
EBI-10257895,EBI-536715 |
RABGGTB |
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.protein geranylgeranylation .visual perception .cellular protein modification process |
.Rab GTPase binding .zinc ion binding .Rab geranylgeranyltransferase activity |
.Rab-protein geranylgeranyltransferase complex |
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EST expression level of Protein Coding Gene (ref. NCBI UniGene EST) |
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Body Sites | |
Tissues | TPM* | |
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brain | 5 | |
kidney | 18 | |
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Health State | |
Tissues | TPM* | |
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normal | 6 | |
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Developmental Stage | |
Tissues | TPM* | |
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adult | 3 | |
fetus | 10 | |
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TPM*: Transcripts per million; transcript expression level measured by expression sequence tags. |
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Expression level of Protein (ref. Human Protein Atlas) |
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RNA-Seq. | |
Tissues | FPKM | |
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adrenal gland | 1.1 | |
cerebral cortex | 18.3 | |
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Cancer | |
Tumor | Number of patients and Staining levels | |
breast cancer | |
carcinoid | |
cervical cancer | |
colorectal cancer | |
endometrial cancer | |
glioma | |
head and neck cancer | |
liver cancer | |
lung cancer | |
lymphoma | |
melanoma | |
ovarian cancer | |
pancreatic cancer | |
prostate cancer | |
renal cancer | |
skin cancer | |
stomach cancer | |
testis cancer | |
thyroid cancer | |
urothelial cancer | |
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RNA-seq colour codes |
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Highly expressed RNAs (FPKM >50) |
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Moderately expressed RNAs (50> FPKM >10) |
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Lower expressed RNAs (10> FPKM >1) |
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The lowest expressed RNAs (FPKM value of 0 or 1) |
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Staining level colour codes |
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Highly expressed protein |
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Moderately expressed protein |
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Lower expressed protein |
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Not Detected |
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