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> Protein (NX_Q86T20)
Protein (NX_Q86T20)
Protein
Gene SymbolC6orf1 to neXtProt (NX_Q86T20)
DescriptionUncharacterized protein C6orf1
Chromosome6
Location6p21.31 (34214157 ~ 34217247) to Ensembl
Sequene Features : Isoforms 1, Variants 20, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .extracellular region
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 20 0
2014-09-19transcript level
1 15 0
2014-05-27transcript level
1 15 0
2014-02-25transcript level
1 15 0
2013-12-09transcript level
1 13 0
2013-11-01transcript level
1 13 0
2013-09-12transcript level
1 13 0
2013-08-17transcript level
1 13 0
2013-07-15transcript level
1 10 0
2013-06-11transcript level
1 10 0
2013-02-12transcript level
1 10 0
2012-12-20transcript level
1 9 0
2012-10-30transcript level
1 10 0
2012-10-07transcript level
1 10 0
2012-08-24transcript level
1 9 0
2012-07-28transcript level
1 9 0
2012-06-08transcript level
1 9 0
2012-05-07transcript level
1 9 0
2012-04-10transcript level
1 9 0
2012-01-13transcript level
1 5 0
2011-12-20transcript level
1 5 0
2011-11-11transcript level
1 5 0
2011-08-23transcript level
1 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q86T20-1
5 0 0 17101.3046
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites25
blood24
bone69
bone marrow102
brain21
cervix20
connective tissue6
embryonic tissue4
eye28
heart11
intestine12
kidney23
liver14
lung20
lymph112
lymph node55
mammary gland33
nerve257
ovary19
pancreas32
placenta17
prostate26
salivary gland49
skin33
spleen37
stomach31
testis9
tonsil58
uterus17
Health State
TissuesTPM*
normal21
bladder carcinoma113
breast (mammary gland) tumor53
chondrosarcoma36
gastrointestinal tumor67
germ cell tumor3
glioma83
head and neck tumor7
kidney tumor14
leukemia52
liver tumor20
lung tumor9
lymphoma69
non-neoplasia10
pancreatic tumor19
primitive neuroectodermal tumor of the CNS15
prostate cancer38
skin tumor55
soft tissue/muscle tissue tumor15
Developmental Stage
TissuesTPM*
adult29
fetus8
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue10.8
adrenal gland18.6
appendix13.5
bone marrow11.5
cerebral cortex33.3
colon7.2
duodenum7.2
esophagus15.5
gallbladder15.7
heart muscle20
kidney10.7
liver3.9
lung17.6
lymph node17
ovary11.9
pancreas5.2
placenta11.3
prostate11.7
salivary gland7.4
skin28.4
small intestine7.8
spleen19.6
stomach9.9
testis9.2
thyroid gland19
urinary bladder19.7
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*611419, gene) Chromosome 6 open reading frame 1; C6ORF1OMIM


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