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> Protein (NX_Q86UP8)
Protein (NX_Q86UP8)
Protein
Gene SymbolGTF2IRD2 to neXtProt (NX_Q86UP8)
DescriptionGeneral transcription factor II-I repeat domain-containing protein 2A
Chromosome7
Location7q11.23 (74210483 ~ 74267847) to Ensembl
Sequene Features : Isoforms 6, Variants 34, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.DNA binding .nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
6 34 0
2014-09-19transcript level
6 23 0
2014-05-27transcript level
6 23 0
2014-02-25transcript level
6 23 0
2013-12-09transcript level
6 20 0
2013-11-01transcript level
6 20 0
2013-09-12transcript level
6 20 0
2013-08-17transcript level
6 20 0
2013-07-15transcript level
6 13 0
2013-06-11transcript level
6 13 0
2013-02-12transcript level
6 9 0
2012-12-20transcript level
6 10 0
2012-10-30transcript level
6 12 0
2012-10-07transcript level
6 12 0
2012-08-24transcript level
6 10 0
2012-07-28transcript level
6 10 0
2012-06-08transcript level
6 4 0
2012-05-07transcript level
6 4 0
2012-04-10transcript level
6 4 0
2012-01-13transcript level
6 4 0
2011-12-20transcript level
6 4 0
2011-11-11transcript level
6 4 0
2011-08-23transcript level
6 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q86UP8-1
0 4 41 107161.784
NX_Q86UP8-2
1 0 8 19935.8301
NX_Q86UP8-3
3 0 18 54412.2349
NX_Q86UP8-4
2 0 4 11885.9292
NX_Q86UP8-5
2 0 10 27859.6806
NX_Q86UP8-6
0 4 21 57208.0145
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-6425928,EBI-2130429 TRIM54  
  .cell differentiation
.multicellular organismal development
.signal transduction
  + 2 more...
.zinc ion binding
.signal transducer activity
.Z disc
.microtubule associated complex
.microtubule
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
bone marrow20
brain2
connective tissue6
embryonic tissue4
eye4
intestine8
kidney14
liver9
lung2
lymph22
mammary gland19
mouth15
muscle9
ovary19
pancreas23
placenta10
prostate5
skin4
spleen18
testis11
trachea38
uterus12
Health State
TissuesTPM*
normal12
breast (mammary gland) tumor10
chondrosarcoma12
colorectal tumor8
germ cell tumor11
head and neck tumor7
lymphoma13
non-neoplasia10
pancreatic tumor19
primitive neuroectodermal tumor of the CNS7
skin tumor7
soft tissue/muscle tissue tumor7
Developmental Stage
TissuesTPM*
adult10
blastocyst16
fetus10
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9.1
adrenal gland12.6
appendix8.5
bone marrow7.7
cerebral cortex7.8
colon12.1
duodenum9
esophagus9.4
gallbladder13.4
heart muscle10.8
kidney12.4
liver6.6
lung17.9
lymph node11.1
ovary31.9
pancreas7.6
placenta7.4
prostate17.7
salivary gland14
skin14.5
small intestine10.2
spleen12.1
stomach15.1
testis8.1
thyroid gland17.3
urinary bladder11.4
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*608899, gene) Gtf2i repeat domain-containing protein 2, alphaOMIM


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