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> Protein (NX_Q86UQ4)
Protein (NX_Q86UQ4)
Protein
Gene SymbolABCA13 to neXtProt (NX_Q86UQ4)
DescriptionATP-binding cassette sub-family A member 13
Chromosome7
Location7p12.3 (48211055 ~ 48687092) to Ensembl
Sequene Features : Isoforms 7, Variants 841, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.transmembrane transport
.phospholipid efflux
.cholesterol efflux
.ATPase activity, coupled to transmembrane movement of substances
.cholesterol transporter activity
.phospholipid transporter activity
.ATP binding
.intracellular membrane-bounded organelle
.integral component of plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
7 841 0
2014-09-19protein level
7 641 0
2014-05-27protein level
7 641 0
2014-02-25protein level
3 636 0
2013-12-09protein level
3 483 0
2013-11-01protein level
3 478 0
2013-09-12protein level
3 478 0
2013-08-17protein level
3 478 0
2013-07-15protein level
3 310 0
2013-06-11protein level
3 310 0
2013-02-12protein level
3 126 0
2012-12-20protein level
3 111 0
2012-10-30protein level
3 181 0
2012-10-07protein level
3 181 0
2012-08-24transcript level
3 160 0
2012-07-28transcript level
3 160 0
2012-06-08transcript level
3 172 0
2012-05-07transcript level
3 148 0
2012-04-10transcript level
3 148 0
2012-01-13transcript level
3 87 0
2011-12-20transcript level
3 87 0
2011-11-11transcript level
3 87 0
2011-08-23transcript level
3 87 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q86UQ4-1
0 245 0 575789.5307
NX_Q86UQ4-2
2 12 0 36896.5076
NX_Q86UQ4-3
0 132 0 312046.9891
NX_Q86UQ4-4
0 245 0 575876.5625
NX_Q86UQ4-5
0 111 0 261941.3346
NX_Q86UQ4-6
0 105 0 249630.2329
NX_Q86UQ4-7
1 108 0 258154.4062
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood179
intestine17
liver4
mouth60
pharynx24
testis4
thymus25
trachea251
Health State
TissuesTPM*
normal1
colorectal tumor35
head and neck tumor37
leukemia232
Developmental Stage
TissuesTPM*
adult14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
bone marrow26.8
testis1.9
thyroid gland1.4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*607807, gene) Atp-binding cassette, subfamily a, member 13; ABCA13OMIM


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