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> Protein (NX_Q86UW8)
Protein (NX_Q86UW8)
Protein
Gene SymbolHAPLN4 to neXtProt (NX_Q86UW8)
DescriptionHyaluronan and proteoglycan link protein 4
Chromosome19
Location19p13.11 (19366450 ~ 19373605) to Ensembl
Sequene Features : Isoforms 1, Variants 42, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.central nervous system development
.cell adhesion
.skeletal system development
.hyaluronic acid binding
.extracellular matrix structural constituent
.proteinaceous extracellular matrix
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 42 6
2014-09-19protein level
1 30 6
2014-05-27protein level
1 30 6
2014-02-25protein level
1 30 6
2013-12-09protein level
1 26 6
2013-11-01protein level
1 25 6
2013-09-12protein level
1 25 6
2013-08-17protein level
1 25 6
2013-07-15transcript level
1 18 6
2013-06-11transcript level
1 18 6
2013-02-12transcript level
1 5 6
2012-12-20transcript level
1 5 6
2012-10-30transcript level
1 7 6
2012-10-07transcript level
1 7 6
2012-08-24transcript level
1 5 6
2012-07-28transcript level
1 5 6
2012-06-08transcript level
1 5 6
2012-05-07transcript level
1 5 6
2012-04-10transcript level
1 5 6
2012-01-13transcript level
1 2 6
2011-12-20transcript level
1 2 6
2011-11-11transcript level
1 2 6
2011-08-23transcript level
1 2 6
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q86UW8-1
21 0 1 42774.375
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain10
embryonic tissue9
eye43
heart22
mouth15
stomach10
Health State
TissuesTPM*
normal7
glioma9
head and neck tumor7
non-neoplasia10
primitive neuroectodermal tumor of the CNS7
Developmental Stage
TissuesTPM*
adult5
embryoid body14
fetus3
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex4.6
duodenum10.5
liver2
small intestine13.9
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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