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> Protein (NX_Q8IVV2)
Protein (NX_Q8IVV2)
Protein
Gene SymbolLOXHD1 to neXtProt (NX_Q8IVV2)
DescriptionLipoxygenase homology domain-containing protein 1
Chromosome18
Location18q21.1 (44056935 ~ 44236996) to Ensembl
Sequene Features : Isoforms 4, Variants 212, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.calcium ion transmembrane transport
.detection of mechanical stimulus
.sensory perception of sound
.calcium channel activity .stereocilium
.membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 212 0
2014-09-19protein level
4 187 0
2014-05-27protein level
4 187 0
2014-02-25protein level
4 185 0
2013-12-09protein level
4 144 0
2013-11-01protein level
4 127 0
2013-09-12protein level
4 127 0
2013-08-17protein level
4 127 0
2013-07-15protein level
4 74 0
2013-06-11protein level
4 74 0
2013-02-12transcript level
4 47 0
2012-12-20transcript level
4 61 0
2012-10-30transcript level
4 71 0
2012-10-07transcript level
4 71 0
2012-08-24transcript level
4 61 0
2012-07-28transcript level
4 60 0
2012-06-08transcript level
4 65 0
2012-05-07transcript level
4 65 0
2012-04-10transcript level
4 65 0
2012-01-13transcript level
5 34 0
2011-12-20transcript level
5 34 0
2011-11-11transcript level
5 34 0
2011-08-23protein level
5 34 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8IVV2-1
40 50 0 221806.3742
NX_Q8IVV2-3
1 50 0 126716.37
NX_Q8IVV2-4
0 20 0 52471.8021
NX_Q8IVV2-5
2 20 0 58637.8429
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood32
brain2
lung2
placenta3
prostate5
testis112
Health State
TissuesTPM*
normal10
germ cell tumor15
leukemia42
Developmental Stage
TissuesTPM*
adult5
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2
bone marrow2.2
testis20
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*613072, gene) Lipoxygenase homology domain-containing 1; LOXHD1OMIM
2(#613079, phenotype) Deafness, autosomal recessive 77; DFNB77OMIM


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