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> Protein (NX_Q8IXF0)
Protein (NX_Q8IXF0)
Protein
Gene SymbolNPAS3 to neXtProt (NX_Q8IXF0)
DescriptionNeuronal PAS domain-containing protein 3
Chromosome14
Location14q13.1 (33404139 ~ 34273382) to Ensembl
Sequene Features : Isoforms 6, Variants 121, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.positive regulation of transcription, DNA-templated
.maternal behavior
.developmental process
  + 4 more...
.signal transducer activity
.DNA binding
.sequence-specific DNA binding RNA polymerase II transcription factor activity
.cytoplasm
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
6 121 0
2014-09-19protein level
6 82 0
2014-05-27transcript level
6 80 0
2014-02-25transcript level
6 79 0
2013-12-09transcript level
6 66 0
2013-11-01transcript level
6 62 0
2013-09-12transcript level
6 62 0
2013-08-17transcript level
6 62 0
2013-07-15transcript level
6 42 0
2013-06-11transcript level
6 42 0
2013-02-12transcript level
6 12 0
2012-12-20transcript level
6 12 0
2012-10-30transcript level
6 14 0
2012-10-07transcript level
6 14 0
2012-08-24transcript level
6 12 0
2012-07-28transcript level
6 12 0
2012-06-08transcript level
6 15 0
2012-05-07transcript level
6 9 0
2012-04-10transcript level
6 9 0
2012-01-13transcript level
6 4 0
2011-12-20transcript level
6 4 0
2011-11-11transcript level
6 4 0
2011-08-23transcript level
6 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8IXF0-1
0 40 0 100742.6782
NX_Q8IXF0-2
0 38 0 97171.0267
NX_Q8IXF0-3
1 38 0 99191.9567
NX_Q8IXF0-4
0 38 0 96958.8749
NX_Q8IXF0-5
0 5 0 16452.0427
NX_Q8IXF0-6
0 10 0 28545.3814
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain33
connective tissue6
embryonic tissue9
kidney4
liver9
lymph node11
nerve64
ovary68
placenta3
testis9
uterus30
Health State
TissuesTPM*
normal9
chondrosarcoma12
germ cell tumor15
glioma102
non-neoplasia31
ovarian tumor91
primitive neuroectodermal tumor of the CNS15
uterine tumor77
Developmental Stage
TissuesTPM*
adult8
embryoid body28
fetus3
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland1.5
cerebral cortex18.6
gallbladder1.5
ovary4.4
spleen1.6
stomach1.3
testis2
thyroid gland4.4
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*609430, gene) Neuronal pas domain protein 3; NPAS3OMIM


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