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> Protein (NX_Q8IZM9)
Protein (NX_Q8IZM9)
Protein
Gene SymbolSLC38A6 to neXtProt (NX_Q8IZM9)
DescriptionProbable sodium-coupled neutral amino acid transporter 6
Chromosome14
Location14q23.1 (61447832 ~ 61550451) to Ensembl
Sequene Features : Isoforms 2, Variants 69, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.sodium ion transport
.amino acid transmembrane transport
.amino acid transmembrane transporter activity .integral component of plasma membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 69 5
2014-09-19protein level
2 59 5
2014-05-27protein level
2 59 5
2014-02-25protein level
2 58 5
2013-12-09protein level
2 42 5
2013-11-01protein level
2 41 5
2013-09-12protein level
2 41 5
2013-08-17protein level
2 41 5
2013-07-15protein level
2 29 5
2013-06-11protein level
2 29 5
2013-02-12transcript level
2 21 4
2012-12-20transcript level
2 20 4
2012-10-30transcript level
2 28 4
2012-10-07transcript level
2 28 2
2012-08-24transcript level
2 27 2
2012-07-28transcript level
2 27 2
2012-06-08transcript level
2 27 2
2012-05-07transcript level
2 20 2
2012-04-10transcript level
2 20 2
2012-01-13transcript level
2 8 2
2011-12-20transcript level
2 8 2
2011-11-11transcript level
2 8 2
2011-08-23transcript level
2 8 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8IZM9-1
1 16 0 50894.8668
NX_Q8IZM9-2
5 16 0 57892.2151
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
bone27
brain10
cervix61
connective tissue26
embryonic tissue14
esophagus198
heart11
intestine8
kidney37
larynx42
liver4
lung41
lymph node11
mammary gland33
mouth45
muscle28
ovary19
parathyroid48
pharynx49
pituitary gland60
placenta3
prostate10
skin9
stomach10
testis29
uterus21
vascular96
Health State
TissuesTPM*
normal15
breast (mammary gland) tumor10
chondrosarcoma24
colorectal tumor8
esophageal tumor231
gastrointestinal tumor16
germ cell tumor15
glioma18
head and neck tumor14
kidney tumor43
leukemia31
liver tumor10
lung tumor9
lymphoma13
ovarian tumor13
primitive neuroectodermal tumor of the CNS7
prostate cancer9
skin tumor15
soft tissue/muscle tissue tumor23
uterine tumor11
Developmental Stage
TissuesTPM*
adult22
embryoid body28
fetus19
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.2
adrenal gland9.2
appendix6.8
bone marrow2.7
cerebral cortex4.9
colon5.9
duodenum5
esophagus4.1
gallbladder12.5
heart muscle3.6
kidney9.3
liver4.7
lung8.7
lymph node11.2
ovary7.4
pancreas2.1
placenta7.3
prostate6.3
salivary gland6.1
skin3.5
small intestine4.4
spleen8.4
stomach5
testis11.1
thyroid gland8.1
urinary bladder10.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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