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> Protein (NX_Q8N443)
Protein (NX_Q8N443)
Protein
Gene SymbolRIBC1 to neXtProt (NX_Q8N443)
DescriptionRIB43A-like with coiled-coils protein 1
ChromosomeX
LocationXp11.22 (53449639 ~ 53458059) to Ensembl
Sequene Features : Isoforms 3, Variants 26, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 26 0
2014-09-19protein level
3 14 0
2014-05-27transcript level
3 14 0
2014-02-25transcript level
3 14 0
2013-12-09transcript level
3 13 0
2013-11-01transcript level
3 13 0
2013-09-12transcript level
3 13 0
2013-08-17transcript level
3 13 0
2013-07-15transcript level
3 8 0
2013-06-11transcript level
3 8 0
2013-02-12transcript level
3 5 0
2012-12-20transcript level
2 4 0
2012-10-30transcript level
2 6 0
2012-10-07transcript level
2 6 0
2012-08-24transcript level
2 6 0
2012-07-28transcript level
2 6 0
2012-06-08transcript level
2 5 0
2012-05-07transcript level
2 5 0
2012-04-10transcript level
2 5 0
2012-01-13transcript level
2 1 0
2011-12-20transcript level
2 1 0
2011-11-11transcript level
2 1 0
2011-08-23transcript level
2 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8N443-1
2 14 0 43987.5964
NX_Q8N443-2
2 6 0 22549.1633
NX_Q8N443-3
1 10 0 27228.473
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10265323,EBI-719493 TRIM27  
  .negative regulation of viral release from host cell
.negative regulation of interleukin-2 secretion
.negative regulation of calcium ion import
  + 17 more...
.metal ion binding
.ligase activity
.zinc ion binding
  + 4 more...
.nuclear membrane
.PML body
.membrane
  + 6 more...
2 EBI-10265323,EBI-739566 KRT15  
  .activation of mitophagy in response to mitochondrial depolarization
.epidermis development
.scaffold protein binding
.structural constituent of cytoskeleton
.extracellular exosome
.intermediate filament
.nucleus
3 EBI-10265323,EBI-618309 GOLGA2  
  .negative regulation of protein binding
.mitotic cell cycle
.syntaxin binding
.protein kinase binding
.Golgi cisterna membrane
.ER to Golgi transport vesicle
.cis-Golgi network
  + 4 more...
4 EBI-10265323,EBI-948001 KRT31  
  .epidermis development .structural constituent of cytoskeleton .extracellular exosome
.intermediate filament
.extracellular space
5 EBI-10265323,EBI-726876 RINT1  
  .regulation of signal transduction involved in mitotic G2 DNA damage checkpoint
.regulation of ER to Golgi vesicle-mediated transport
.Golgi vesicle transport
  + 2 more...
.N/A .endoplasmic reticulum membrane
.endoplasmic reticulum
6 EBI-10265323,EBI-742397 TEX11  
  .chiasma assembly
.negative regulation of apoptotic process
.fertilization
  + 6 more...
.N/A .central element
7 EBI-10265323,EBI-744586 EMILIN1  
  .extracellular matrix organization
.positive regulation of cell-substrate adhesion
.cell adhesion
.extracellular matrix constituent conferring elasticity .extracellular exosome
.extracellular matrix
.collagen trimer
  + 2 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone13
brain2
embryonic tissue4
eye9
kidney4
lung5
mouth45
pharynx49
placenta3
stomach20
testis32
trachea57
uterus17
Health State
TissuesTPM*
normal6
chondrosarcoma12
gastrointestinal tumor16
germ cell tumor3
head and neck tumor22
uterine tumor33
Developmental Stage
TissuesTPM*
adult6
blastocyst16
fetus7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland3.3
gallbladder1.6
heart muscle1.2
kidney3.5
lung4.1
ovary2
pancreas1.1
prostate1.5
salivary gland1.3
testis24.4
thyroid gland3.5
urinary bladder1.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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