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> Protein (NX_Q8N584)
Protein (NX_Q8N584)
Protein
Gene SymbolTTC39C to neXtProt (NX_Q8N584)
DescriptionTetratricopeptide repeat protein 39C
Chromosome18
Location18q11.2 (21572737 ~ 21715574) to Ensembl
Sequene Features : Isoforms 3, Variants 56, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 56 0
2014-09-19protein level
3 46 0
2014-05-27protein level
3 46 0
2014-02-25protein level
3 45 0
2013-12-09protein level
3 30 0
2013-11-01protein level
3 27 0
2013-09-12protein level
3 27 0
2013-08-17protein level
3 27 0
2013-07-15protein level
3 20 0
2013-06-11protein level
3 20 0
2013-02-12protein level
2 6 2
2012-12-20protein level
2 6 2
2012-10-30protein level
2 9 2
2012-10-07protein level
2 9 1
2012-08-24protein level
2 8 1
2012-07-28protein level
2 8 1
2012-06-08protein level
2 10 1
2012-05-07protein level
2 7 1
2012-04-10protein level
2 7 1
2012-01-13protein level
2 9 1
2011-12-20protein level
2 9 1
2011-11-11protein level
2 9 1
2011-08-23protein level
2 9 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8N584-1
1 27 0 65827.3261
NX_Q8N584-2
1 25 0 59179.0966
NX_Q8N584-3
1 2 0 8348.1712
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
ascites25
blood49
bone13
brain10
cervix20
connective tissue13
eye33
heart22
intestine8
kidney4
liver92
lung14
lymph node89
mammary gland26
muscle9
ovary9
pancreas14
pharynx49
prostate5
salivary gland49
skin4
spleen37
testis27
uterus47
Health State
TissuesTPM*
normal5
breast (mammary gland) tumor32
chondrosarcoma24
gastrointestinal tumor8
germ cell tumor18
kidney tumor14
leukemia21
ovarian tumor13
primitive neuroectodermal tumor of the CNS7
Developmental Stage
TissuesTPM*
adult26
fetus35
infant42
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue12.2
adrenal gland20
appendix14.7
bone marrow22.2
cerebral cortex6.2
colon5.7
duodenum8.4
esophagus11.9
gallbladder23.2
heart muscle2.7
kidney1.9
liver41.1
lung8.7
lymph node21.9
ovary5.8
pancreas4.4
placenta2.4
prostate8.3
salivary gland8.9
skin32.1
small intestine7.5
spleen10.9
stomach8.9
testis20.5
thyroid gland2.3
urinary bladder14.4
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)


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