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> Protein (NX_Q8N5G0)
Protein (NX_Q8N5G0)
Protein
Gene SymbolSMIM20 to neXtProt (NX_Q8N5G0)
DescriptionSmall integral membrane protein 20
Chromosome4
Location4p15.2 (25863452 ~ 25931435) to Ensembl
Sequene Features : Isoforms 2, Variants 4, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 4 0
2014-09-19protein level
2 5 0
2014-05-27protein level
2 5 0
2014-02-25protein level
2 4 0
2013-12-09protein level
2 4 0
2013-11-01protein level
2 4 0
2013-09-12protein level
2 4 0
2013-08-17protein level
2 4 0
2013-07-15protein level
2 4 0
2013-06-11protein level
2 4 0
2013-02-12protein level
2 4 0
2012-12-20protein level
2 4 0
2012-10-30protein level
2 4 0
2012-10-07protein level
2 4 0
2012-08-24protein level
2 4 0
2012-07-28protein level
2 4 0
2012-06-08protein level
2 4 0
2012-05-07protein level
2 4 0
2012-04-10protein level
2 4 0
2012-01-13protein level
2 4 0
2011-12-20protein level
2 4 0
2011-11-11protein level
2 4 0
2011-08-23protein level
2 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8N5G0-1
4 3 0 18391.4296
NX_Q8N5G0-2
0 3 0 7697.089
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
blood8
bone41
bone marrow41
brain12
connective tissue73
ear62
embryonic tissue28
eye14
heart22
intestine30
kidney61
liver24
lung23
lymph node144
mammary gland19
muscle9
ovary68
pancreas60
parathyroid194
pharynx24
placenta21
prostate21
skin23
testis27
thyroid21
tonsil58
uterus25
vascular19
Health State
TissuesTPM*
normal30
adrenal tumor79
breast (mammary gland) tumor10
chondrosarcoma48
colorectal tumor26
gastrointestinal tumor8
germ cell tumor45
glioma27
head and neck tumor7
kidney tumor29
leukemia10
liver tumor31
lymphoma13
non-neoplasia20
ovarian tumor91
skin tumor7
soft tissue/muscle tissue tumor79
uterine tumor11
Developmental Stage
TissuesTPM*
adult35
embryoid body14
blastocyst16
fetus19
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue22.3
adrenal gland27.8
appendix19.4
bone marrow9
cerebral cortex17.2
colon29.1
duodenum36.7
esophagus14.5
gallbladder28
heart muscle33.3
kidney36.5
liver17.1
lung19.9
lymph node32.9
ovary28.9
pancreas16.9
placenta15.2
prostate23.5
salivary gland25.9
skin8.1
small intestine33.8
spleen19.7
stomach26.8
testis23
thyroid gland33.5
urinary bladder26.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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