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> Protein (NX_Q8NDB6)
Protein (NX_Q8NDB6)
Protein
Gene SymbolFAM156B to neXtProt (NX_Q8NDB6)
DescriptionProtein FAM156A/FAM156B
ChromosomeX
LocationXp11.22 (52920336 ~ 52937587) to Ensembl
Sequene Features : Isoforms 1, Variants 1, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .integral component of membrane
.nuclear envelope
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 1 1
2014-09-19protein level
1 1 1
2014-05-27protein level
1 1 1
2014-02-25protein level
1 1 1
2013-12-09protein level
1 0 1
2013-11-01protein level
1 0 1
2013-09-12protein level
1 0 0
2013-08-17protein level
1 0 0
2013-07-15transcript level
1 0 0
2013-06-11transcript level
1 0 0
2013-02-12transcript level
1 0 0
2012-12-20transcript level
1 0 0
2012-10-30transcript level
1 0 0
2012-10-07transcript level
1 0 0
2012-08-24transcript level
1 0 0
2012-07-28transcript level
1 0 0
2012-06-08transcript level
1 5 0
2012-05-07transcript level
1 5 0
2012-04-10transcript level
1 5 0
2012-01-13transcript level
1 5 0
2011-12-20transcript level
1 5 0
2011-11-11transcript level
1 5 0
2011-08-23transcript level
1 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8NDB6-1
4 0 0 24396.249
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-749727,EBI-742397 TEX11  
  .chiasma assembly
.negative regulation of apoptotic process
.fertilization
  + 6 more...
.N/A .central element
2 EBI-749727,EBI-747353 ATRIP  
  .DNA repair
.DNA replication
.DNA damage checkpoint
.K63-linked polyubiquitin binding .nucleoplasm
.nucleus
3 EBI-749727,EBI-1105213 TFIP11  
  .biomineral tissue development
.RNA processing
.regulation of transcription, DNA-templated
  + 2 more...
.DNA binding .catalytic step 2 spliceosome
.U2-type post-mRNA release spliceosomal complex
.nuclear speck
  + 3 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland60
ascites25
blood32
bone139
brain112
cervix41
connective tissue46
embryonic tissue61
eye14
heart44
intestine51
kidney37
larynx42
liver9
lung5
lymph22
mammary gland6
mouth15
ovary29
placenta38
skin28
testis4
thymus12
uterus25
vascular19
Health State
TissuesTPM*
normal65
adrenal tumor79
breast (mammary gland) tumor118
cervical tumor57
chondrosarcoma120
colorectal tumor97
gastrointestinal tumor33
germ cell tumor98
glioma83
head and neck tumor44
kidney tumor58
leukemia31
liver tumor20
lung tumor48
lymphoma27
non-neoplasia31
ovarian tumor52
pancreatic tumor9
primitive neuroectodermal tumor of the CNS165
prostate cancer57
skin tumor47
soft tissue/muscle tissue tumor7
Developmental Stage
TissuesTPM*
adult11
embryoid body28
blastocyst146
neonate32
fetus59
infant85
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue17.8
adrenal gland18.6
appendix14
bone marrow7.6
cerebral cortex12.2
colon10.4
duodenum15.9
esophagus7.8
gallbladder13.6
heart muscle8.8
kidney7.7
liver4.6
lung17.2
lymph node15.9
ovary13.5
pancreas4.5
placenta39.1
prostate13.6
salivary gland8.9
skin39.9
small intestine14.5
spleen19.8
stomach13
testis15.2
thyroid gland12.9
urinary bladder11.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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