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> Protein (NX_Q8NDT2)
Protein (NX_Q8NDT2)
Protein
Gene SymbolRBM15B to neXtProt (NX_Q8NDT2)
DescriptionPutative RNA-binding protein 15B
Chromosome3
Location3p21.2 (51428731 ~ 51435330) to Ensembl
Sequene Features : Isoforms 2, Variants 51, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.viral process
.RNA splicing
.mRNA processing
  + 3 more...
.poly(A) RNA binding
.RNA binding
.nucleotide binding
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 51 9
2014-09-19protein level
2 34 9
2014-05-27protein level
2 34 9
2014-02-25protein level
1 33 9
2013-12-09protein level
1 28 9
2013-11-01protein level
1 26 9
2013-09-12protein level
1 26 9
2013-08-17protein level
1 26 9
2013-07-15protein level
1 16 9
2013-06-11protein level
1 16 9
2013-02-12protein level
1 5 11
2012-12-20protein level
1 5 11
2012-10-30protein level
1 5 11
2012-10-07protein level
1 5 11
2012-08-24protein level
1 5 11
2012-07-28protein level
1 5 11
2012-06-08protein level
1 6 11
2012-05-07protein level
1 4 11
2012-04-10protein level
1 4 11
2012-01-13protein level
1 1 11
2011-12-20protein level
1 1 11
2011-11-11protein level
1 1 10
2011-08-23protein level
1 1 10
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8NDT2-1
13 24 1 97146.2258
NX_Q8NDT2-2
0 24 1 63117.0694
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-726721,EBI-741200 NAV2  
  .vagus nerve development
.glossopharyngeal nerve development
.optic nerve development
  + 4 more...
.heparin binding
.ATP binding
.helicase activity
.nucleoplasm
.interstitial matrix
2 EBI-10269922,EBI-396137 CDC23  
  .protein K11-linked ubiquitination
.regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
.positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
  + 11 more...
.ubiquitin-protein transferase activity .cytosol
.anaphase-promoting complex
.nucleoplasm
.intracellular
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites25
bladder33
blood32
bone55
bone marrow102
brain7
cervix20
ear62
eye33
heart22
intestine21
kidney9
lung29
lymph22
lymph node33
mammary gland39
muscle18
ovary19
pancreas9
placenta3
prostate26
skin18
testis2
thyroid64
uterus34
Health State
TissuesTPM*
normal32
breast (mammary gland) tumor53
cervical tumor144
chondrosarcoma36
colorectal tumor71
esophageal tumor57
gastrointestinal tumor33
germ cell tumor53
glioma83
head and neck tumor67
kidney tumor72
leukemia63
liver tumor62
lung tumor48
lymphoma124
non-neoplasia20
ovarian tumor52
pancreatic tumor38
primitive neuroectodermal tumor of the CNS62
prostate cancer19
retinoblastoma150
skin tumor63
soft tissue/muscle tissue tumor55
uterine tumor66
Developmental Stage
TissuesTPM*
adult41
embryoid body28
blastocyst32
neonate32
fetus21
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue10.9
adrenal gland6.5
appendix10
bone marrow6.7
cerebral cortex6.7
colon12.7
duodenum8.5
esophagus12.9
gallbladder9.9
heart muscle7.3
kidney8
liver3.4
lung11.4
lymph node10.5
ovary13.6
pancreas6.8
placenta7.7
prostate9
salivary gland8.4
skin13.7
small intestine9.8
spleen10.8
stomach10.1
testis9.7
thyroid gland10.7
urinary bladder13.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*612602, gene) Rna-binding motif protein 15b; RBM15BOMIM


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