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> Protein (NX_Q8NEK5)
Protein (NX_Q8NEK5)
Protein
Gene SymbolZNF548 to neXtProt (NX_Q8NEK5)
DescriptionZinc finger protein 548
Chromosome19
Location19q13.43 (57901218 ~ 57912786) to Ensembl
Sequene Features : Isoforms 2, Variants 78, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.metal ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 78 0
2014-09-19transcript level
2 64 0
2014-05-27transcript level
2 64 0
2014-02-25transcript level
2 64 0
2013-12-09transcript level
2 48 0
2013-11-01transcript level
2 48 0
2013-09-12transcript level
2 48 0
2013-08-17transcript level
2 48 0
2013-07-15transcript level
2 22 0
2013-06-11transcript level
2 22 0
2013-02-12transcript level
2 5 0
2012-12-20transcript level
2 7 0
2012-10-30transcript level
2 11 0
2012-10-07transcript level
2 11 0
2012-08-24transcript level
2 11 0
2012-07-28transcript level
2 11 0
2012-06-08transcript level
2 12 0
2012-05-07transcript level
2 11 0
2012-04-10transcript level
2 11 0
2012-01-13transcript level
2 8 0
2011-12-20transcript level
2 8 0
2011-11-11transcript level
2 8 0
2011-08-23transcript level
2 8 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8NEK5-1
0 20 4 62686.7033
NX_Q8NEK5-2
1 20 4 63928.2421
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
blood8
brain6
connective tissue6
embryonic tissue32
esophagus49
eye4
heart11
intestine4
kidney18
liver9
lung8
lymph node33
mammary gland33
muscle9
placenta10
prostate5
spleen18
testis52
thymus37
thyroid21
uterus12
vascular19
Health State
TissuesTPM*
normal14
breast (mammary gland) tumor53
colorectal tumor8
esophageal tumor57
germ cell tumor26
head and neck tumor7
leukemia21
liver tumor10
lymphoma13
retinoblastoma21
soft tissue/muscle tissue tumor15
Developmental Stage
TissuesTPM*
adult12
embryoid body28
blastocyst65
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9.3
adrenal gland7.6
appendix15.8
bone marrow16.1
cerebral cortex5.7
colon5.1
duodenum5.9
esophagus7.4
gallbladder10
heart muscle6.2
kidney5.9
liver6
lung10
lymph node18
ovary11.8
pancreas2.6
placenta8.9
prostate6.5
salivary gland5.1
skin7.8
small intestine7.9
spleen16.6
stomach6.4
testis7.4
thyroid gland11.7
urinary bladder9.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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