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> Protein (NX_Q8NHQ9)
Protein (NX_Q8NHQ9)
Protein
Gene SymbolDDX55 to neXtProt (NX_Q8NHQ9)
DescriptionATP-dependent RNA helicase DDX55
Chromosome12
Location12q24.31 (124086624 ~ 124105488) to Ensembl
Sequene Features : Isoforms 2, Variants 75, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.RNA secondary structure unwinding .poly(A) RNA binding
.ATP binding
.ATP-dependent RNA helicase activity
.membrane
.cytoplasm
.nucleolus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 75 8
2014-09-19protein level
1 62 8
2014-05-27protein level
1 62 8
2014-02-25protein level
1 62 8
2013-12-09protein level
1 49 8
2013-11-01protein level
1 47 8
2013-09-12protein level
1 47 8
2013-08-17protein level
1 47 8
2013-07-15protein level
1 30 8
2013-06-11protein level
1 30 8
2013-02-12protein level
1 24 8
2012-12-20protein level
1 24 8
2012-10-30protein level
1 23 8
2012-10-07protein level
1 23 8
2012-08-24protein level
1 21 8
2012-07-28protein level
1 21 8
2012-06-08protein level
1 27 8
2012-05-07protein level
1 21 8
2012-04-10protein level
1 21 8
2012-01-13protein level
1 21 8
2011-12-20protein level
1 21 8
2011-11-11protein level
1 21 7
2011-08-23protein level
1 21 7
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8NHQ9-1
21 8 0 68502.9337
NX_Q8NHQ9-2
0 8 0 24278.9036
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-5459844,EBI-10171774 KRTAP10-8  
  .N/A .N/A .keratin filament
2 EBI-5459844,EBI-741181 AGTRAP  
  .regulation of blood pressure
.response to hypoxia
.angiotensin type II receptor activity .intracellular membrane-bounded organelle
.cytoplasmic vesicle membrane
.integral component of membrane
  + 6 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland60
ascites75
blood40
bone83
brain24
cervix20
connective tissue20
embryonic tissue42
eye28
intestine12
kidney42
larynx42
liver29
lung11
lymph67
lymph node22
mammary gland13
muscle28
nerve193
pancreas14
parathyroid48
placenta28
prostate5
skin33
spleen74
testis27
uterus17
vascular19
Health State
TissuesTPM*
normal24
adrenal tumor79
breast (mammary gland) tumor21
cervical tumor28
chondrosarcoma72
colorectal tumor17
gastrointestinal tumor25
germ cell tumor26
glioma37
head and neck tumor7
kidney tumor29
leukemia10
liver tumor10
lung tumor9
lymphoma83
non-neoplasia31
pancreatic tumor9
primitive neuroectodermal tumor of the CNS55
prostate cancer9
retinoblastoma21
skin tumor15
soft tissue/muscle tissue tumor31
uterine tumor11
Developmental Stage
TissuesTPM*
adult32
embryoid body42
blastocyst65
fetus23
infant85
juvenile71
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue11.1
adrenal gland12.4
appendix17.1
bone marrow18.2
cerebral cortex11
colon9.9
duodenum11.2
esophagus8.7
gallbladder9
heart muscle4.4
kidney8
liver6.1
lung11.2
lymph node19.4
ovary14.2
pancreas7.5
placenta11
prostate11.6
salivary gland8.7
skin17.2
small intestine11
spleen16.5
stomach10.8
testis12.2
thyroid gland9.5
urinary bladder11.1
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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