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> Protein (NX_Q8TAF8)
Protein (NX_Q8TAF8)
Protein
Gene SymbolLHFPL5 to neXtProt (NX_Q8TAF8)
DescriptionTetraspan membrane protein of hair cell stereocilia
Chromosome6
Location6p21.31 (35773070 ~ 35801651) to Ensembl
Sequene Features : Isoforms 1, Variants 50, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.auditory receptor cell stereocilium organization
.detection of mechanical stimulus involved in sensory perception of sound
.ion transport
.N/A .stereocilium bundle tip
.apical plasma membrane
.integral component of membrane
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 50 0
2014-09-19protein level
1 39 0
2014-05-27protein level
1 39 0
2014-02-25protein level
1 39 0
2013-12-09protein level
1 33 0
2013-11-01protein level
1 27 0
2013-09-12protein level
1 27 0
2013-08-17protein level
1 27 0
2013-07-15protein level
1 21 0
2013-06-11protein level
1 21 0
2013-02-12protein level
1 10 0
2012-12-20protein level
1 9 0
2012-10-30protein level
1 10 0
2012-10-07protein level
1 10 0
2012-08-24protein level
1 10 0
2012-07-28protein level
1 10 0
2012-06-08protein level
1 10 0
2012-05-07protein level
1 7 0
2012-04-10protein level
1 7 0
2012-01-13protein level
1 4 0
2011-12-20protein level
1 4 0
2011-11-11protein level
1 4 0
2011-08-23protein level
1 4 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8TAF8-1
9 0 0 24184.1044
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2820517,EBI-749265 CCDC155  
  .chromosome localization to nuclear envelope involved in homologous chromosome segregation
.oogenesis
.spermatogenesis
  + 2 more...
.N/A .integral component of membrane
.nuclear outer membrane
.lateral element
.chromosome, telomeric region
2 EBI-2820517,EBI-1058791 GGT7  
  .leukotriene biosynthetic process
.glutathione biosynthetic process
.glutathione metabolic process
.glutathione hydrolase activity
.gamma-glutamyltransferase activity
.anchored component of external side of plasma membrane
.integral component of membrane
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain2
muscle9
Health State
TissuesTPM*
soft tissue/muscle tissue tumor7
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
cerebral cortex1.5
pancreas1.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*609427, gene) Lhfp-like protein 5; LHFPL5OMIM
2(#610265, phenotype) Deafness, autosomal recessive 67; DFNB67OMIM


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