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> Protein (NX_Q8TEQ0)
Protein (NX_Q8TEQ0)
Protein
Gene SymbolSNX29 to neXtProt (NX_Q8TEQ0)
DescriptionSorting nexin-29
Chromosome16
Location16p13.12 (12070594 ~ 12668146) to Ensembl
Sequene Features : Isoforms 2, Variants 84, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .phosphatidylinositol binding .extracellular exosome
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 84 8
2014-09-19protein level
2 58 8
2014-05-27protein level
2 58 8
2014-02-25protein level
2 58 8
2013-12-09protein level
2 30 8
2013-11-01protein level
2 28 8
2013-09-12protein level
2 28 5
2013-08-17protein level
2 28 5
2013-07-15protein level
2 18 5
2013-06-11protein level
2 18 5
2013-02-12protein level
2 12 11
2012-12-20protein level
2 13 11
2012-10-30protein level
2 19 11
2012-10-07protein level
2 19 6
2012-08-24protein level
2 18 6
2012-07-28protein level
2 18 6
2012-06-08protein level
2 2 6
2012-05-07protein level
2 2 6
2012-04-10protein level
2 2 6
2012-01-13protein level
2 2 6
2011-12-20protein level
2 8 6
2011-11-11protein level
2 8 6
2011-08-23protein level
2 6 6
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q8TEQ0-1
2 35 0 91196.8691
NX_Q8TEQ0-2
1 35 0 89088.6106
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
bladder33
blood32
bone marrow20
brain17
connective tissue26
ear124
embryonic tissue4
eye110
heart33
intestine17
kidney42
larynx42
liver4
lung14
lymph135
lymph node334
mammary gland26
mouth30
ovary29
pancreas23
pharynx24
placenta31
prostate21
skin9
spleen18
testis18
thymus62
tonsil176
uterus43
vascular19
Health State
TissuesTPM*
normal43
bladder carcinoma56
breast (mammary gland) tumor21
chondrosarcoma36
colorectal tumor26
germ cell tumor22
glioma18
head and neck tumor22
kidney tumor29
leukemia84
lung tumor29
lymphoma83
non-neoplasia20
ovarian tumor26
pancreatic tumor47
skin tumor7
soft tissue/muscle tissue tumor31
uterine tumor44
Developmental Stage
TissuesTPM*
adult33
blastocyst16
fetus37
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.3
adrenal gland4.4
appendix9.8
bone marrow8.5
cerebral cortex8
colon4.6
duodenum2.9
esophagus12.2
gallbladder8.8
heart muscle5.9
kidney24.4
liver1.3
lung7.9
lymph node17.5
ovary12.4
pancreas3
placenta10.3
prostate3.5
salivary gland5
skin6.1
small intestine3.4
spleen9.9
stomach4.2
testis11.5
thyroid gland13.3
urinary bladder11.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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