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> Protein (NX_Q92738)
Protein (NX_Q92738)
Protein
Gene SymbolUSP6NL to neXtProt (NX_Q92738)
DescriptionUSP6 N-terminal-like protein
Chromosome10
Location10p14 (11495945 ~ 11653753) to Ensembl
Sequene Features : Isoforms 2, Variants 78, PTMs 13 to neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of Golgi organization
.plasma membrane to endosome transport
.positive regulation of GTPase activity
  + 3 more...
.Rab GTPase binding
.GTPase activator activity
.cytoplasmic vesicle
.cytoplasmic membrane-bounded vesicle
.plasma membrane
.Golgi apparatus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 78 13
2014-09-19protein level
2 61 13
2014-05-27protein level
2 61 13
2014-02-25protein level
2 61 13
2013-12-09protein level
2 40 13
2013-11-01protein level
2 40 13
2013-09-12protein level
2 40 13
2013-08-17protein level
2 40 13
2013-07-15protein level
2 34 13
2013-06-11protein level
2 34 13
2013-02-12protein level
2 9 28
2012-12-20protein level
2 10 28
2012-10-30protein level
2 14 28
2012-10-07protein level
2 14 14
2012-08-24protein level
2 10 14
2012-07-28protein level
2 10 14
2012-06-08protein level
2 14 14
2012-05-07protein level
2 14 14
2012-04-10protein level
2 14 14
2012-01-13protein level
2 15 14
2011-12-20protein level
2 15 14
2011-11-11protein level
2 15 11
2011-08-23protein level
2 15 11
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q92738-1
1 37 0 94045.3709
NX_Q92738-2
2 37 0 95937.2931
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites100
bladder100
blood8
bone27
brain8
cervix61
embryonic tissue37
eye4
heart11
intestine8
kidney4
liver29
lung11
lymph node122
mammary gland13
mouth60
pancreas51
pituitary gland60
placenta17
prostate5
skin23
spleen18
stomach10
testis43
thymus12
thyroid21
trachea19
umbilical cord145
uterus25
Health State
TissuesTPM*
normal3
bladder carcinoma113
breast (mammary gland) tumor32
cervical tumor86
chondrosarcoma24
colorectal tumor17
gastrointestinal tumor42
germ cell tumor7
glioma27
head and neck tumor29
leukemia10
liver tumor52
lung tumor9
pancreatic tumor38
retinoblastoma43
skin tumor31
uterine tumor33
Developmental Stage
TissuesTPM*
adult2
embryoid body28
blastocyst16
neonate64
fetus3
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue6
adrenal gland8
appendix9.6
bone marrow10.9
cerebral cortex6.6
colon9.3
duodenum6.6
esophagus32.7
gallbladder7.9
heart muscle4.1
kidney6.8
liver11.8
lung8.3
lymph node19.2
ovary9.5
pancreas3.5
placenta9.7
prostate6.2
salivary gland5.1
skin7.2
small intestine6.6
spleen16.1
stomach9.6
testis27.7
thyroid gland7.1
urinary bladder7.7
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*605405, gene) Usp6 n-terminal-like; USP6NLOMIM


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