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> Protein (NX_Q92966)
Protein (NX_Q92966)
Protein
Gene SymbolSNAPC3 to neXtProt (NX_Q92966)
DescriptionsnRNA-activating protein complex subunit 3
Chromosome9
Location9p22.3 (15422702 ~ 15465951) to Ensembl
Sequene Features : Isoforms 1, Variants 44, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.gene expression
.snRNA transcription
.transcription from RNA polymerase III promoter
  + 2 more...
.DNA binding .nucleolus
.nucleoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 44 4
2014-09-19protein level
1 40 4
2014-05-27protein level
1 40 4
2014-02-25protein level
1 40 4
2013-12-09protein level
1 26 5
2013-11-01protein level
1 25 5
2013-09-12protein level
1 25 5
2013-08-17protein level
1 25 4
2013-07-15protein level
1 19 0
2013-06-11protein level
1 19 0
2013-02-12protein level
1 9 1
2012-12-20protein level
1 10 1
2012-10-30protein level
1 12 1
2012-10-07protein level
1 12 1
2012-08-24protein level
1 12 1
2012-07-28protein level
1 11 1
2012-06-08protein level
1 11 1
2012-05-07protein level
1 9 1
2012-04-10protein level
1 9 1
2012-01-13protein level
1 4 1
2011-12-20protein level
1 4 1
2011-11-11protein level
1 4 1
2011-08-23protein level
1 4 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q92966-1
21 0 0 46722.4787
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-1760638,EBI-1104570 CEP57L1  
  .microtubule anchoring .N/A .microtubule
.microtubule organizing center
.cytoplasm
2 EBI-1760638,EBI-742664 HSD17B14  
  .steroid catabolic process .testosterone 17-beta-dehydrogenase (NADP+) activity
.estradiol 17-beta-dehydrogenase activity
.cytosol
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
blood8
bone marrow20
brain31
connective tissue6
embryonic tissue56
esophagus99
eye38
heart11
intestine17
kidney52
larynx42
liver9
lung20
lymph node33
mammary gland33
mouth45
muscle28
nerve64
ovary9
pancreas42
parathyroid48
pharynx24
placenta10
prostate26
skin42
stomach94
testis144
thymus12
thyroid107
trachea19
umbilical cord72
uterus30
vascular38
Health State
TissuesTPM*
normal39
breast (mammary gland) tumor32
colorectal tumor8
esophageal tumor115
gastrointestinal tumor84
germ cell tumor37
head and neck tumor59
kidney tumor43
leukemia10
liver tumor20
lung tumor29
non-neoplasia10
pancreatic tumor38
primitive neuroectodermal tumor of the CNS39
prostate cancer38
retinoblastoma86
skin tumor39
soft tissue/muscle tissue tumor31
uterine tumor22
Developmental Stage
TissuesTPM*
adult32
embryoid body71
blastocyst32
neonate64
fetus19
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue11.3
adrenal gland20.2
appendix14.6
bone marrow4.2
cerebral cortex18.8
colon15.1
duodenum15.5
esophagus14.2
gallbladder13.9
heart muscle15
kidney14.8
liver6.2
lung10.8
lymph node15.5
ovary13.1
pancreas5.2
placenta13.7
prostate18.4
salivary gland7.7
skin11.2
small intestine16.5
spleen13.8
stomach11.7
testis53.8
thyroid gland15.5
urinary bladder14.7
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*602348, gene) Small nuclear rna-activating protein complex, polypeptide 3; SNAPC3OMIM


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