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> Protein (NX_Q96A09)
Protein (NX_Q96A09)
Protein
Gene SymbolFAM46B to neXtProt (NX_Q96A09)
DescriptionProtein FAM46B
Chromosome1
Location1p36.11 (27331511 ~ 27339327) to Ensembl
Sequene Features : Isoforms 1, Variants 49, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
1 49 0
2014-09-19transcript level
1 44 0
2014-05-27transcript level
1 44 0
2014-02-25transcript level
1 42 0
2013-12-09transcript level
1 33 0
2013-11-01transcript level
1 32 0
2013-09-12transcript level
1 32 0
2013-08-17transcript level
1 32 0
2013-07-15transcript level
1 18 0
2013-06-11transcript level
1 18 0
2013-02-12transcript level
1 6 0
2012-12-20transcript level
1 6 0
2012-10-30transcript level
1 8 0
2012-10-07transcript level
1 8 0
2012-08-24transcript level
1 8 0
2012-07-28transcript level
1 8 0
2012-06-08transcript level
1 8 0
2012-05-07transcript level
1 8 0
2012-04-10transcript level
1 8 0
2012-01-13transcript level
1 3 0
2011-12-20transcript level
1 3 0
2011-11-11transcript level
1 3 0
2011-08-23transcript level
1 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96A09-1
16 0 1 46658.1209
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-752030,EBI-3505701 SOX5  
  .positive regulation of mesenchymal stem cell differentiation
.cellular response to transforming growth factor beta stimulus
.positive regulation of cartilage development
  + 10 more...
.transcription regulatory region DNA binding
.sequence-specific DNA binding transcription factor activity
.sequence-specific DNA binding RNA polymerase II transcription factor activity
.nuclear transcription factor complex
2 EBI-752030,EBI-490630 SH2D2A  
  .vascular endothelial growth factor receptor signaling pathway
.cell differentiation
.positive regulation of signal transduction
  + 3 more...
.SH3/SH2 adaptor activity .cytosol
.cytoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone13
brain4
embryonic tissue23
eye28
liver9
lung8
placenta17
prostate26
skin85
testis18
thyroid21
uterus12
Health State
TissuesTPM*
normal11
chondrosarcoma12
germ cell tumor15
glioma27
head and neck tumor7
liver tumor20
non-neoplasia10
primitive neuroectodermal tumor of the CNS7
skin tumor71
Developmental Stage
TissuesTPM*
adult9
embryoid body14
blastocyst32
fetus1
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue4.6
appendix2.4
colon3.4
esophagus50.9
gallbladder2
heart muscle10.9
kidney1.9
lung7.7
placenta3.1
prostate6.4
salivary gland18.8
skin26.9
small intestine1.5
testis3.3
thyroid gland2.9
urinary bladder6.7
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)


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