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> Protein (NX_Q96AH0)
Protein (NX_Q96AH0)
Protein
Gene SymbolNABP1 to neXtProt (NX_Q96AH0)
DescriptionSOSS complex subunit B2
Chromosome2
Location2q32.3 (192542794 ~ 192561385) to Ensembl
Sequene Features : Isoforms 3, Variants 10, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.response to ionizing radiation
.mitotic cell cycle checkpoint
.cellular response to DNA damage stimulus
  + 2 more...
.RNA binding
.single-stranded DNA binding
.SOSS complex
.cytoplasm
.nucleoplasm
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 10 0
2014-09-19protein level
3 22 0
2014-05-27protein level
3 22 0
2014-02-25protein level
3 22 0
2013-12-09protein level
3 16 0
2013-11-01protein level
3 16 0
2013-09-12protein level
3 16 0
2013-08-17protein level
3 16 0
2013-07-15protein level
3 9 0
2013-06-11protein level
3 9 0
2013-02-12protein level
3 5 0
2012-12-20protein level
3 5 0
2012-10-30protein level
3 8 0
2012-10-07protein level
3 8 0
2012-08-24protein level
3 8 0
2012-07-28protein level
3 8 0
2012-06-08protein level
3 8 0
2012-05-07protein level
3 7 0
2012-04-10protein level
3 7 0
2012-01-13protein level
3 5 0
2011-12-20protein level
3 5 0
2011-11-11protein level
3 5 0
2011-08-23protein level
3 5 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96AH0-1
0 7 1 22409.2332
NX_Q96AH0-2
0 4 1 13570.4281
NX_Q96AH0-3
2 3 1 14667.6278
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2889252,EBI-743526 RBMX  
  .cellular response to interleukin-1
.protein homooligomerization
.positive regulation of mRNA splicing, via spliceosome
  + 10 more...
.poly(A) RNA binding
.mRNA binding
.single-stranded RNA binding
  + 4 more...
.catalytic step 2 spliceosome
.extracellular exosome
.supraspliceosomal complex
  + 6 more...
2 EBI-2889252,EBI-717422 TFCP2  
  .regulation of transcription from RNA polymerase II promoter
.transcription, DNA-templated
.sequence-specific DNA binding
.protein C-terminus binding
.sequence-specific DNA binding transcription factor activity
.DNA binding
.nucleus
3 EBI-2889252,EBI-2340269 MKRN3  
  .protein ubiquitination .ligase activity
.zinc ion binding
.ribonucleoprotein complex
4 EBI-2889252,EBI-742808 KHDRBS2  
  .regulation of transcription, DNA-templated
.transcription, DNA-templated
.poly(U) RNA binding
.poly(A) binding
.nucleus
5 EBI-2889252,EBI-945792 QKI  
  .3'-UTR-mediated mRNA destabilization
.mRNA transport
.long-chain fatty acid biosynthetic process
  + 8 more...
.poly(A) RNA binding
.mRNA binding
.cytoplasm
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue233
adrenal gland30
bladder66
blood98
bone41
bone marrow164
brain16
connective tissue53
embryonic tissue32
esophagus198
eye9
intestine34
kidney33
liver19
lung62
lymph node33
mammary gland79
mouth120
muscle47
ovary216
pancreas4
placenta105
prostate5
salivary gland49
skin23
spleen131
stomach41
testis32
thymus75
thyroid42
uterus68
vascular38
Health State
TissuesTPM*
normal42
adrenal tumor79
bladder carcinoma56
breast (mammary gland) tumor42
chondrosarcoma48
colorectal tumor26
esophageal tumor173
gastrointestinal tumor33
germ cell tumor15
glioma37
head and neck tumor52
kidney tumor29
liver tumor10
lung tumor38
lymphoma13
non-neoplasia51
ovarian tumor288
primitive neuroectodermal tumor of the CNS23
prostate cancer9
skin tumor39
soft tissue/muscle tissue tumor15
uterine tumor22
Developmental Stage
TissuesTPM*
adult56
embryoid body28
blastocyst32
neonate96
fetus16
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue25
adrenal gland12
appendix74.1
bone marrow5.7
cerebral cortex4.7
colon14.1
duodenum38.2
esophagus32.5
gallbladder23.1
heart muscle3.2
kidney13.8
liver8.9
lung17.9
lymph node45
ovary9.4
pancreas3.3
placenta39.3
prostate6.8
salivary gland3.5
skin9.8
small intestine55.6
spleen58
stomach13.1
testis23
thyroid gland3
urinary bladder30.9
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*612103, gene) Oligonucleotide/oligosaccharide-binding fold-containing protein 2a;OMIM


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