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> Protein (NX_Q96C92)
Protein (NX_Q96C92)
Protein
Gene SymbolSDCCAG3 to neXtProt (NX_Q96C92)
DescriptionSerologically defined colon cancer antigen 3
Chromosome9
Location9q34.3 (139296377 ~ 139305061) to Ensembl
Sequene Features : Isoforms 4, Variants 63, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.retrograde transport, endosome to plasma membrane
.cell division
.regulation of cytokinesis
  + 2 more...
.N/A .recycling endosome
.midbody
.early endosome
.endosome
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 63 3
2014-09-19protein level
4 50 3
2014-05-27protein level
4 50 3
2014-02-25protein level
4 50 3
2013-12-09protein level
4 34 3
2013-11-01protein level
4 34 2
2013-09-12protein level
4 34 2
2013-08-17protein level
4 34 2
2013-07-15protein level
4 19 2
2013-06-11protein level
4 19 2
2013-02-12protein level
4 14 8
2012-12-20protein level
4 12 8
2012-10-30protein level
4 16 8
2012-10-07protein level
4 16 2
2012-08-24protein level
4 15 2
2012-07-28protein level
4 15 2
2012-06-08protein level
4 17 2
2012-05-07protein level
4 15 2
2012-04-10protein level
4 15 2
2012-01-13protein level
4 10 2
2011-12-20protein level
4 10 2
2011-11-11protein level
4 10 2
2011-08-23protein level
4 10 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96C92-1
1 16 0 47931.5107
NX_Q96C92-2
1 15 0 45597.4571
NX_Q96C92-3
1 13 0 41406.2485
NX_Q96C92-4
1 13 0 40033.7886
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10178036,EBI-727004 SDCBP  
  .positive regulation of extracellular exosome assembly
.positive regulation of exosomal secretion
.ephrin receptor signaling pathway
  + 9 more...
.protein N-terminus binding
.protein heterodimerization activity
.syndecan binding
  + 4 more...
.blood microparticle
.extracellular exosome
.melanosome
  + 12 more...
2 EBI-10178036,EBI-351257 DDX6  
  .exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
.cytoplasmic mRNA processing body assembly
.viral RNA genome packaging
  + 4 more...
.poly(A) RNA binding
.protein domain specific binding
.ATP binding
  + 3 more...
.intracellular membrane-bounded organelle
.RISC complex
.membrane
  + 5 more...
3 EBI-10178036,EBI-541426 AP1M1  
  .membrane organization
.regulation of defense response to virus by virus
.endosome to melanosome transport
  + 5 more...
.N/A .extracellular exosome
.trans-Golgi network membrane
.clathrin-coated endocytic vesicle membrane
  + 6 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites75
blood32
bone69
bone marrow20
brain28
cervix247
connective tissue46
embryonic tissue28
eye47
heart78
intestine47
kidney37
liver19
lung62
lymph112
lymph node122
mammary gland52
mouth60
muscle18
nerve193
ovary88
pancreas32
pituitary gland60
placenta52
prostate42
skin137
spleen18
stomach20
testis73
thyroid21
tonsil117
trachea19
uterus38
Health State
TissuesTPM*
normal51
breast (mammary gland) tumor75
cervical tumor231
chondrosarcoma108
colorectal tumor26
gastrointestinal tumor50
germ cell tumor72
glioma149
head and neck tumor29
kidney tumor58
leukemia74
liver tumor10
lung tumor58
lymphoma96
ovarian tumor65
pancreatic tumor38
primitive neuroectodermal tumor of the CNS125
prostate cancer48
retinoblastoma21
skin tumor103
soft tissue/muscle tissue tumor39
uterine tumor55
Developmental Stage
TissuesTPM*
adult42
embryoid body14
blastocyst32
fetus105
juvenile89
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue16.3
adrenal gland17.2
appendix29
bone marrow9.8
cerebral cortex14
colon15.8
duodenum24.9
esophagus16.4
gallbladder17.4
heart muscle10.2
kidney16.6
liver16.5
lung17.4
lymph node32.9
ovary20
pancreas18.7
placenta13.8
prostate18.4
salivary gland14.7
skin27.9
small intestine18
spleen32.8
stomach22.7
testis35.6
thyroid gland17.9
urinary bladder20.1
Tissues
TissuesExpression level
adrenal glandMedium
appendixMedium
bone marrowLow
breastMedium
bronchusMedium
cerebellumLow
cerebral cortexMedium
cervix, uterineMedium
colonHigh
duodenumMedium
endometrium 1Low
endometrium 2Low
epididymisMedium
esophagusMedium
fallopian tubeHigh
gallbladderHigh
heart muscleMedium
kidneyMedium
liverLow
lungMedium
lymph nodeMedium
nasopharynxHigh
oral mucosaMedium
ovaryMedium
pancreasHigh
parathyroid glandLow
placentaMedium
prostateMedium
rectumMedium
salivary glandMedium
seminal vesicleMedium
skeletal muscleMedium
skin 2Medium
small intestineMedium
smooth muscleHigh
soft tissue 2Medium
spleenLow
stomach 1Medium
stomach 2Medium
testisMedium
thyroid glandMedium
tonsilMedium
urinary bladderMedium
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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