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> Protein (NX_Q96CN7)
Protein (NX_Q96CN7)
Protein
Gene SymbolISOC1 to neXtProt (NX_Q96CN7)
DescriptionIsochorismatase domain-containing protein 1
Chromosome5
Location5q23.3 (128430444 ~ 128449721) to Ensembl
Sequene Features : Isoforms 1, Variants 25, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .catalytic activity .extracellular exosome
.peroxisome
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 25 1
2014-09-19protein level
1 24 1
2014-05-27protein level
1 24 1
2014-02-25protein level
1 24 0
2013-12-09protein level
1 22 0
2013-11-01protein level
1 22 0
2013-09-12protein level
1 22 0
2013-08-17protein level
1 22 0
2013-07-15protein level
1 11 0
2013-06-11protein level
1 11 0
2013-02-12protein level
1 2 0
2012-12-20protein level
1 0 0
2012-10-30protein level
1 3 0
2012-10-07protein level
1 3 0
2012-08-24protein level
1 3 0
2012-07-28protein level
1 3 0
2012-06-08protein level
1 3 0
2012-05-07protein level
1 3 0
2012-04-10protein level
1 3 0
2012-01-13protein level
1 1 0
2011-12-20protein level
1 1 0
2011-11-11protein level
1 1 0
2011-08-23protein level
1 1 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96CN7-1
12 0 0 32216.0301
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2805787,EBI-749920 CALCOCO1  
  .positive regulation of transcription from RNA polymerase II promoter
.positive regulation of transcription, DNA-templated
.intracellular steroid hormone receptor signaling pathway
  + 3 more...
.armadillo repeat domain binding
.transcription regulatory region DNA binding
.sequence-specific DNA binding
  + 6 more...
.intracellular membrane-bounded organelle
.cytoplasm
.nucleus
.nuclear chromatin
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland91
ascites50
bladder200
blood16
bone13
brain30
cervix247
connective tissue26
embryonic tissue42
esophagus99
eye62
heart122
intestine43
kidney75
liver34
lung35
lymph node33
mammary gland59
muscle18
nerve64
ovary9
pancreas89
pharynx24
placenta49
prostate52
salivary gland148
skin42
stomach94
testis25
thymus12
trachea38
umbilical cord145
uterus47
vascular38
Health State
TissuesTPM*
normal39
bladder carcinoma170
breast (mammary gland) tumor64
cervical tumor231
chondrosarcoma12
colorectal tumor8
esophageal tumor115
gastrointestinal tumor84
germ cell tumor41
glioma18
kidney tumor43
leukemia10
liver tumor41
lung tumor19
lymphoma55
pancreatic tumor95
primitive neuroectodermal tumor of the CNS118
prostate cancer67
retinoblastoma193
skin tumor23
soft tissue/muscle tissue tumor55
uterine tumor55
Developmental Stage
TissuesTPM*
adult39
embryoid body42
blastocyst32
neonate64
fetus35
juvenile161
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue23
adrenal gland29.3
appendix13.7
bone marrow8.1
cerebral cortex9.7
colon20.8
duodenum28.7
esophagus23.4
gallbladder18
heart muscle52.1
kidney26.3
liver49.6
lung12.8
lymph node14.6
ovary16.5
pancreas9.3
placenta14.4
prostate19.7
salivary gland21.6
skin20
small intestine26.6
spleen9
stomach17.7
testis11.9
thyroid gland13.2
urinary bladder21.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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