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> Protein (NX_Q96EE3)
Protein (NX_Q96EE3)
Protein
Gene SymbolSEH1L to neXtProt (NX_Q96EE3)
DescriptionNucleoporin SEH1
Chromosome18
Location18p11.21 (12947132 ~ 12987535) to Ensembl
Sequene Features : Isoforms 2, Variants 45, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of cellular response to heat
.transmembrane transport
.attachment of mitotic spindle microtubules to kinetochore
  + 24 more...
.N/A .nuclear pore outer ring
.cytosol
.nuclear envelope
.condensed chromosome kinetochore
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 45 6
2014-09-19protein level
2 33 6
2014-05-27protein level
2 33 6
2014-02-25protein level
2 32 6
2013-12-09protein level
2 25 6
2013-11-01protein level
2 21 5
2013-09-12protein level
2 21 5
2013-08-17protein level
2 21 5
2013-07-15protein level
2 14 3
2013-06-11protein level
2 14 3
2013-02-12protein level
2 4 3
2012-12-20protein level
2 4 3
2012-10-30protein level
2 7 3
2012-10-07protein level
2 7 2
2012-08-24protein level
2 7 2
2012-07-28protein level
2 7 2
2012-06-08protein level
2 8 2
2012-05-07protein level
2 8 2
2012-04-10protein level
2 8 2
2012-01-13protein level
2 6 2
2011-12-20protein level
2 6 2
2011-11-11protein level
2 6 2
2011-08-23protein level
2 6 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96EE3-1
3 19 0 46548.7304
NX_Q96EE3-2
0 19 0 39623.2882
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adrenal gland30
ascites25
blood40
bone111
bone marrow20
brain29
cervix41
connective tissue33
ear186
embryonic tissue42
eye57
heart44
intestine51
kidney23
liver29
lung23
lymph67
lymph node55
mammary gland59
mouth90
muscle18
ovary49
pancreas74
pharynx24
placenta31
prostate68
skin42
stomach62
testis41
trachea154
uterus51
vascular19
Health State
TissuesTPM*
normal39
breast (mammary gland) tumor10
cervical tumor57
chondrosarcoma108
colorectal tumor17
gastrointestinal tumor84
germ cell tumor45
glioma9
head and neck tumor44
kidney tumor29
leukemia42
liver tumor31
lymphoma41
non-neoplasia20
ovarian tumor65
pancreatic tumor38
primitive neuroectodermal tumor of the CNS39
prostate cancer77
retinoblastoma129
skin tumor31
soft tissue/muscle tissue tumor47
uterine tumor44
Developmental Stage
TissuesTPM*
adult42
embryoid body71
blastocyst16
neonate32
fetus43
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue13.2
adrenal gland11
appendix15.8
bone marrow9.3
cerebral cortex19.4
colon14.8
duodenum9.7
esophagus13.9
gallbladder10.4
heart muscle10.1
kidney12.8
liver12.1
lung10.5
lymph node18.7
ovary10.5
pancreas6.3
placenta11
prostate9.8
salivary gland7.2
skin13
small intestine9.5
spleen11.2
stomach10.6
testis16.7
thyroid gland12.9
urinary bladder11.5
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*609263, gene) Seh1-like protein; SEH1LOMIM


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