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> Protein (NX_Q96GJ1)
Protein (NX_Q96GJ1)
Protein
Gene SymbolTRMT2B to neXtProt (NX_Q96GJ1)
DescriptiontRNA (uracil(54)-C(5))-methyltransferase homolog
ChromosomeX
LocationXq22.1 (100264335 ~ 100307105) to Ensembl
Sequene Features : Isoforms 3, Variants 50, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.RNA processing .S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity .mitochondrion
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
3 50 0
2014-09-19protein level
3 37 0
2014-05-27protein level
3 37 0
2014-02-25protein level
3 37 0
2013-12-09protein level
3 27 0
2013-11-01protein level
3 27 0
2013-09-12protein level
3 27 0
2013-08-17protein level
3 27 0
2013-07-15protein level
3 19 0
2013-06-11protein level
3 19 0
2013-02-12protein level
3 7 0
2012-12-20protein level
3 7 0
2012-10-30protein level
3 9 0
2012-10-07protein level
3 9 0
2012-08-24protein level
3 5 0
2012-07-28protein level
3 5 0
2012-06-08protein level
3 3 0
2012-05-07protein level
3 3 0
2012-04-10protein level
3 3 0
2012-01-13protein level
3 3 0
2011-12-20protein level
3 3 0
2011-11-11protein level
3 3 0
2011-08-23transcript level
3 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96GJ1-1
0 23 0 56440.2623
NX_Q96GJ1-2
1 21 0 54971.3302
NX_Q96GJ1-3
1 20 0 51452.49
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-10195625,EBI-750962 ERCC1  
  .chromosome organization
.embryonic organ development
.oogenesis
  + 26 more...
.protein domain specific binding
.protein C-terminus binding
.endonuclease activity
  + 2 more...
.cytoplasm
.transcription factor TFIID complex
.nucleoplasm
  + 3 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bladder33
blood24
bone13
bone marrow20
brain22
cervix164
connective tissue6
esophagus49
eye62
heart44
intestine43
kidney28
larynx85
liver14
lung17
lymph225
lymph node22
mammary gland13
mouth30
muscle9
ovary19
pancreas18
parathyroid145
placenta56
prostate21
skin42
spleen37
stomach41
testis13
thymus50
thyroid42
tonsil117
trachea19
uterus30
vascular19
Health State
TissuesTPM*
normal17
breast (mammary gland) tumor21
cervical tumor144
chondrosarcoma12
colorectal tumor71
esophageal tumor57
gastrointestinal tumor42
germ cell tumor64
glioma27
head and neck tumor44
kidney tumor29
leukemia21
liver tumor31
lung tumor29
lymphoma138
ovarian tumor26
pancreatic tumor38
primitive neuroectodermal tumor of the CNS23
prostate cancer9
retinoblastoma236
skin tumor47
uterine tumor66
Developmental Stage
TissuesTPM*
adult21
neonate32
fetus12
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue5.5
adrenal gland6.5
appendix8.4
bone marrow5.8
cerebral cortex3.6
colon9.7
duodenum6.4
esophagus6.5
gallbladder6.9
heart muscle7
kidney8.9
liver3.7
lung7.5
lymph node10.9
ovary7.7
pancreas3.5
placenta4.3
prostate7
salivary gland7.9
skin6
small intestine8.1
spleen10.2
stomach8.5
testis3.1
thyroid gland10.5
urinary bladder6.8
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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