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> Protein (NX_Q96HR8)
Protein (NX_Q96HR8)
Protein
Gene SymbolNAF1 to neXtProt (NX_Q96HR8)
DescriptionH/ACA ribonucleoprotein complex non-core subunit NAF1
Chromosome4
Location4q32.2 (164031225 ~ 164088073) to Ensembl
Sequene Features : Isoforms 2, Variants 56, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.ribosome biogenesis
.rRNA processing
.pseudouridine synthesis
.poly(A) RNA binding
.RNA binding
.cytoplasm
.small nucleolar ribonucleoprotein complex
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 56 2
2014-09-19protein level
2 47 2
2014-05-27protein level
2 47 2
2014-02-25protein level
2 47 2
2013-12-09protein level
2 36 2
2013-11-01protein level
2 35 2
2013-09-12protein level
2 35 2
2013-08-17protein level
2 35 2
2013-07-15protein level
2 24 1
2013-06-11protein level
2 24 1
2013-02-12protein level
1 11 2
2012-12-20protein level
1 10 2
2012-10-30protein level
1 14 2
2012-10-07protein level
1 14 2
2012-08-24protein level
1 11 2
2012-07-28protein level
1 11 2
2012-06-08protein level
1 11 2
2012-05-07protein level
1 11 2
2012-04-10protein level
1 11 2
2012-01-13protein level
1 7 2
2011-12-20protein level
1 7 2
2011-11-11protein level
1 7 2
2011-08-23protein level
1 7 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96HR8-1
3 9 0 53682.9539
NX_Q96HR8-2
4 9 0 41868.4165
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2515597,EBI-746056 RBFOX2  
  .neuromuscular process controlling balance
.dendrite morphogenesis
.negative regulation of transcription, DNA-templated
  + 8 more...
.poly(A) RNA binding
.transcription factor binding
.mRNA binding
  + 3 more...
.cytoplasm
.nucleoplasm
.nucleus
2 EBI-2515597,EBI-713091 DKC1  
  .mRNA pseudouridine synthesis
.snRNA pseudouridine synthesis
.rRNA pseudouridine synthesis
  + 6 more...
.poly(A) RNA binding
.pseudouridine synthase activity
.RNA binding
.telomerase activity
.box H/ACA snoRNP complex
.Cajal body
.cytoplasm
  + 4 more...
3 EBI-2515597,EBI-7875264 DAB1  
  .lateral motor column neuron migration
.Golgi localization
.negative regulation of axonogenesis
  + 15 more...
.N/A .perinuclear region of cytoplasm
.apical part of cell
.neuronal cell body
  + 5 more...
4 EBI-2515597,EBI-77694 BCL2  
  .positive regulation of intrinsic apoptotic signaling pathway
.negative regulation of intrinsic apoptotic signaling pathway
.negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
  + 111 more...
.BH3 domain binding
.protein heterodimerization activity
.sequence-specific DNA binding
  + 6 more...
.pore complex
.myelin sheath
.nuclear membrane
  + 8 more...
5 EBI-2515597,EBI-7957930 FAM168A  
  .N/A .N/A .N/A
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
bone marrow20
brain8
connective tissue6
embryonic tissue18
eye9
heart11
kidney4
liver4
lung2
muscle18
placenta3
skin14
stomach31
testis2
trachea19
uterus4
Health State
TissuesTPM*
normal9
chondrosarcoma24
gastrointestinal tumor8
germ cell tumor18
leukemia10
liver tumor10
lymphoma27
primitive neuroectodermal tumor of the CNS7
skin tumor7
soft tissue/muscle tissue tumor7
Developmental Stage
TissuesTPM*
adult4
blastocyst48
neonate32
fetus12
juvenile53
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue7.5
adrenal gland7.1
appendix6.8
bone marrow9.3
cerebral cortex7.3
colon6.9
duodenum3.9
esophagus5.7
gallbladder6.7
heart muscle4.4
kidney6
liver3.8
lung6.1
lymph node6.8
ovary8.6
pancreas3
placenta5.5
prostate7.6
salivary gland4.6
skin4.7
small intestine4.1
spleen5.7
stomach6
testis9.1
thyroid gland7.6
urinary bladder6
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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