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> Protein (NX_Q96KV7)
Protein (NX_Q96KV7)
Protein
Gene SymbolWDR90 to neXtProt (NX_Q96KV7)
DescriptionWD repeat-containing protein 90
Chromosome16
Location16p13.3 (699311 ~ 717833) to Ensembl
Sequene Features : Isoforms 5, Variants 201, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
5 201 0
2014-09-19protein level
5 162 0
2014-05-27transcript level
5 162 0
2014-02-25transcript level
5 161 0
2013-12-09transcript level
5 89 0
2013-11-01transcript level
5 83 0
2013-09-12transcript level
5 83 1
2013-08-17transcript level
5 83 1
2013-07-15transcript level
5 65 1
2013-06-11transcript level
5 65 1
2013-02-12protein level
5 29 4
2012-12-20protein level
5 25 4
2012-10-30protein level
5 47 4
2012-10-07protein level
5 47 2
2012-08-24protein level
5 45 2
2012-07-28protein level
5 45 2
2012-06-08protein level
5 49 2
2012-05-07protein level
5 47 2
2012-04-10protein level
5 47 2
2012-01-13protein level
5 23 2
2011-12-20protein level
5 23 2
2011-11-11protein level
5 23 2
2011-08-23protein level
5 15 2
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96KV7-1
39 46 0 187316.6243
NX_Q96KV7-10
2 10 0 29353.1777
NX_Q96KV7-3
0 38 0 76928.3093
NX_Q96KV7-5
1 37 0 77056.3675
NX_Q96KV7-7
1 12 0 32411.9567
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-9478492,EBI-740322 RBPMS  
  .positive regulation of SMAD protein import into nucleus
.positive regulation of pathway-restricted SMAD protein phosphorylation
.RNA processing
  + 2 more...
.poly(A) RNA binding
.poly(A) binding
.transcription coactivator activity
.nucleotide binding
.cytoplasm
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
ascites75
bone55
bone marrow41
brain29
cervix20
embryonic tissue42
eye28
heart11
intestine34
kidney18
larynx42
liver14
lung29
lymph22
lymph node100
mammary gland13
muscle28
nerve64
ovary39
pancreas14
parathyroid48
pituitary gland60
placenta7
prostate10
stomach20
testis41
thymus75
trachea19
uterus30
Health State
TissuesTPM*
normal29
breast (mammary gland) tumor10
cervical tumor28
chondrosarcoma36
colorectal tumor8
gastrointestinal tumor42
glioma74
head and neck tumor7
kidney tumor14
lung tumor29
lymphoma13
non-neoplasia10
ovarian tumor26
pancreatic tumor19
primitive neuroectodermal tumor of the CNS39
prostate cancer9
uterine tumor66
Developmental Stage
TissuesTPM*
adult23
embryoid body28
blastocyst113
fetus32
juvenile35
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.5
adrenal gland14.1
appendix9.6
bone marrow22
cerebral cortex5.8
colon9.2
duodenum13.9
esophagus7.6
gallbladder11.9
heart muscle4.5
kidney9.7
liver4
lung15
lymph node10
ovary15.1
pancreas9.3
placenta7.9
prostate15.9
salivary gland11.3
skin20.8
small intestine12.4
spleen9.3
stomach18.7
testis55.9
thyroid gland11.5
urinary bladder8.3
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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