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> Protein (NX_Q96LX7)
Protein (NX_Q96LX7)
Protein
Gene SymbolCCDC17 to neXtProt (NX_Q96LX7)
DescriptionCoiled-coil domain-containing protein 17
Chromosome1
Location1p34.1 (46085716 ~ 46089729) to Ensembl
Sequene Features : Isoforms 4, Variants 51, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
4 51 0
2014-09-19transcript level
4 40 0
2014-05-27transcript level
4 40 0
2014-02-25transcript level
4 38 0
2013-12-09transcript level
4 31 0
2013-11-01transcript level
4 30 0
2013-09-12transcript level
4 30 0
2013-08-17transcript level
4 30 0
2013-07-15transcript level
4 16 0
2013-06-11transcript level
4 16 0
2013-02-12transcript level
4 13 0
2012-12-20transcript level
4 14 0
2012-10-30transcript level
4 13 0
2012-10-07transcript level
4 13 0
2012-08-24transcript level
4 11 0
2012-07-28transcript level
4 11 0
2012-06-08transcript level
4 19 0
2012-05-07transcript level
4 17 0
2012-04-10transcript level
4 17 0
2012-01-13transcript level
4 19 0
2011-12-20transcript level
4 19 0
2011-11-11transcript level
4 19 0
2011-08-23transcript level
4 19 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96LX7-2
0 21 0 47796.9201
NX_Q96LX7-3
1 5 0 11557.469
NX_Q96LX7-4
2 29 0 67678.8942
NX_Q96LX7-5
1 29 0 66555.2474
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-719840,EBI-618309 GOLGA2  
  .negative regulation of protein binding
.mitotic cell cycle
.syntaxin binding
.protein kinase binding
.Golgi cisterna membrane
.ER to Golgi transport vesicle
.cis-Golgi network
  + 4 more...
2 EBI-719840,EBI-948001 KRT31  
  .epidermis development .structural constituent of cytoskeleton .extracellular exosome
.intermediate filament
.extracellular space
3 EBI-719840,EBI-742948 MTUS2  
  .N/A .protein homodimerization activity
.microtubule binding
.microtubule
.cytoplasm
.nucleus
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
heart22
lung41
testis4
trachea270
uterus8
Health State
TissuesTPM*
normal6
lung tumor19
uterine tumor22
Developmental Stage
TissuesTPM*
adult5
fetus12
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
bone marrow1.4
duodenum1.4
lung9.1
lymph node1
ovary1.3
skin1
small intestine1.2
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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