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> Protein (NX_Q96NB3)
Protein (NX_Q96NB3)
Protein
Gene SymbolZNF830 to neXtProt (NX_Q96NB3)
DescriptionZinc finger protein 830
Chromosome17
Location17q12 (33288549 ~ 33290205) to Ensembl
Sequene Features : Isoforms 1, Variants 43, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.intestinal epithelial structure maintenance
.cell division
.chromosome organization
  + 4 more...
.metal ion binding .nuclear speck
.cytoplasm
.nucleoplasm
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 43 5
2014-09-19protein level
1 31 5
2014-05-27protein level
1 31 5
2014-02-25protein level
1 31 5
2013-12-09protein level
1 23 5
2013-11-01protein level
1 23 5
2013-09-12protein level
1 23 5
2013-08-17protein level
1 23 5
2013-07-15protein level
1 19 4
2013-06-11protein level
1 19 4
2013-02-12protein level
1 12 5
2012-12-20protein level
1 12 5
2012-10-30protein level
1 12 5
2012-10-07protein level
1 12 5
2012-08-24protein level
1 12 5
2012-07-28protein level
1 12 5
2012-06-08protein level
1 12 5
2012-05-07protein level
1 8 5
2012-04-10protein level
1 8 5
2012-01-13protein level
1 6 5
2011-12-20protein level
1 6 5
2011-11-11protein level
1 6 4
2011-08-23protein level
1 6 4
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96NB3-1
16 0 0 41973.1284
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-3920997,EBI-2512328 AQR  
  .mRNA splicing, via spliceosome .poly(A) RNA binding .catalytic step 2 spliceosome
.membrane
.nucleoplasm
.nucleus
2 EBI-3920997,EBI-713456 IK  
  .cell-cell signaling
.immune response
.identical protein binding .nucleolus
.nucleoplasm
.extracellular space
3 EBI-3920997,EBI-7705988 PPIL2  
  .protein localization to plasma membrane
.leukocyte migration
.blood coagulation
  + 3 more...
.ubiquitin protein ligase activity
.ubiquitin-ubiquitin ligase activity
.ligase activity
.peptidyl-prolyl cis-trans isomerase activity
.plasma membrane
.Golgi lumen
.cytoplasm
  + 2 more...
4 EBI-3920997,EBI-749111 SF3B2  
  .viral process
.gene expression
.RNA splicing
  + 2 more...
.poly(A) RNA binding .catalytic step 2 spliceosome
.U12-type spliceosomal complex
.spliceosomal complex
.nucleoplasm
5 EBI-3920997,EBI-632715 SNW1  
  .cellular response to retinoic acid
.positive regulation of vitamin D receptor signaling pathway
.regulation of vitamin D receptor signaling pathway
  + 19 more...
.SMAD binding
.poly(A) RNA binding
.retinoic acid receptor binding
  + 5 more...
.catalytic step 2 spliceosome
.nuclear matrix
.spliceosomal complex
  + 3 more...
6 EBI-3920997,EBI-946095 PCBP1  
  .gene expression
.RNA splicing
.mRNA splicing, via spliceosome
.poly(A) RNA binding
.RNA binding
.single-stranded DNA binding
.extracellular exosome
.intracellular membrane-bounded organelle
.ribonucleoprotein complex
  + 3 more...
7 EBI-3920997,EBI-538479 PRPF8  
  .gene expression
.RNA splicing
.mRNA processing
  + 3 more...
.pre-mRNA intronic binding
.K63-linked polyubiquitin binding
.poly(A) RNA binding
  + 5 more...
.catalytic step 2 spliceosome
.nuclear speck
.membrane
  + 3 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
brain9
connective tissue6
ear124
embryonic tissue32
esophagus49
eye19
heart11
intestine17
kidney42
larynx85
lung41
lymph45
lymph node144
mammary gland13
muscle9
ovary19
pancreas4
pharynx49
placenta14
salivary gland49
skin28
spleen37
testis27
thymus12
uterus21
Health State
TissuesTPM*
normal22
breast (mammary gland) tumor21
chondrosarcoma12
colorectal tumor8
esophageal tumor57
gastrointestinal tumor59
germ cell tumor34
head and neck tumor22
kidney tumor14
leukemia21
lung tumor19
lymphoma41
ovarian tumor13
primitive neuroectodermal tumor of the CNS62
skin tumor31
soft tissue/muscle tissue tumor15
uterine tumor22
Developmental Stage
TissuesTPM*
adult16
embryoid body28
blastocyst32
fetus37
infant170
juvenile17
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue9.6
adrenal gland9.9
appendix13.3
bone marrow11.5
cerebral cortex10.3
colon12.1
duodenum10.5
esophagus9
gallbladder10.1
heart muscle6.3
kidney11.6
liver7.5
lung10
lymph node19.3
ovary17.8
pancreas4.6
placenta11.5
prostate13.5
salivary gland8.1
skin9.8
small intestine9.9
spleen17.9
stomach12.2
testis13.1
thyroid gland12.7
urinary bladder12.4
Tissues
TissuesExpression level
adrenal glandHigh
appendixHigh
bone marrowMedium
breastMedium
bronchusMedium
cerebellumMedium
cerebral cortexMedium
cervix, uterineHigh
colonHigh
duodenumHigh
endometrium 1Medium
endometrium 2Medium
epididymisMedium
esophagusHigh
fallopian tubeHigh
gallbladderHigh
heart muscleMedium
hippocampusMedium
kidneyHigh
lateral ventricleMedium
liverLow
lungMedium
lymph nodeMedium
nasopharynxMedium
oral mucosaHigh
ovaryMedium
pancreasMedium
parathyroid glandMedium
placentaHigh
prostateMedium
rectumHigh
salivary glandHigh
seminal vesicleMedium
skeletal muscleMedium
skin 1High
skin 2Medium
small intestineHigh
smooth muscleMedium
soft tissue 1Medium
soft tissue 2Medium
stomach 1High
stomach 2High
testisHigh
thyroid glandHigh
tonsilMedium
urinary bladderHigh
vaginaMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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