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> Protein (NX_Q96NG5)
Protein (NX_Q96NG5)
Protein
Gene SymbolZNF558 to neXtProt (NX_Q96NG5)
DescriptionZinc finger protein 558
Chromosome19
Location19p13.2 (8920380 ~ 8943004) to Ensembl
Sequene Features : Isoforms 2, Variants 47, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.regulation of transcription, DNA-templated
.transcription, DNA-templated
.metal ion binding
.DNA binding
.nucleus
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
2 47 0
2014-09-19transcript level
1 39 0
2014-05-27transcript level
1 39 0
2014-02-25transcript level
1 38 0
2013-12-09transcript level
1 28 0
2013-11-01transcript level
1 28 0
2013-09-12transcript level
1 28 0
2013-08-17transcript level
1 28 0
2013-07-15transcript level
1 14 0
2013-06-11transcript level
1 14 0
2013-02-12transcript level
1 7 0
2012-12-20transcript level
1 8 0
2012-10-30transcript level
1 9 0
2012-10-07transcript level
1 9 0
2012-08-24transcript level
1 9 0
2012-07-28transcript level
1 9 0
2012-06-08transcript level
1 9 0
2012-05-07transcript level
1 8 0
2012-04-10transcript level
1 8 0
2012-01-13transcript level
1 3 0
2011-12-20transcript level
1 3 0
2011-11-11transcript level
1 3 0
2011-08-23protein level
1 3 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96NG5-1
2 15 4 45725.4889
NX_Q96NG5-2
0 15 2 37946.5385
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
blood8
bone27
brain9
cervix20
embryonic tissue23
esophagus99
eye19
intestine4
kidney4
liver4
lung17
lymph node22
muscle18
ovary29
pancreas28
pituitary gland60
placenta3
prostate5
skin14
stomach41
testis9
thyroid21
uterus34
Health State
TissuesTPM*
normal14
cervical tumor28
chondrosarcoma24
esophageal tumor115
germ cell tumor3
head and neck tumor7
liver tumor10
ovarian tumor39
pancreatic tumor38
prostate cancer9
skin tumor7
soft tissue/muscle tissue tumor7
uterine tumor44
Developmental Stage
TissuesTPM*
adult11
embryoid body14
blastocyst48
fetus19
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue8.5
adrenal gland12.9
appendix11.2
bone marrow5.6
cerebral cortex8
colon8.9
duodenum8.9
esophagus7.4
gallbladder9.9
heart muscle5.6
kidney6.7
liver4.3
lung10
lymph node11.8
ovary18
pancreas3.8
placenta7.2
prostate10.3
salivary gland6.3
skin14.4
small intestine9.2
spleen11.2
stomach8.5
testis9.2
thyroid gland15
urinary bladder9.9
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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