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> Protein (NX_Q96NL0)
Protein (NX_Q96NL0)
Protein
Gene SymbolRUNDC3B to neXtProt (NX_Q96NL0)
DescriptionRUN domain-containing protein 3B
Chromosome7
Location7q21.12 (87256864 ~ 87461611) to Ensembl
Sequene Features : Isoforms 5, Variants 80, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .N/A
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01transcript level
5 80 0
2014-09-19transcript level
5 48 0
2014-05-27transcript level
5 48 0
2014-02-25transcript level
5 46 0
2013-12-09transcript level
5 40 0
2013-11-01transcript level
5 37 0
2013-09-12transcript level
5 37 0
2013-08-17transcript level
5 37 0
2013-07-15transcript level
5 24 0
2013-06-11transcript level
5 24 0
2013-02-12protein level
4 10 4
2012-12-20protein level
4 9 4
2012-10-30protein level
4 10 4
2012-10-07protein level
4 10 1
2012-08-24protein level
4 10 1
2012-07-28protein level
4 10 1
2012-06-08protein level
4 7 1
2012-05-07protein level
4 7 1
2012-04-10protein level
4 7 1
2012-01-13protein level
4 7 1
2011-12-20protein level
4 7 1
2011-11-11protein level
4 7 1
2011-08-23protein level
4 7 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96NL0-1
1 18 1 52780.3712
NX_Q96NL0-2
1 15 0 36794.0648
NX_Q96NL0-3
1 9 0 18513.2247
NX_Q96NL0-4
0 18 1 45079.3968
NX_Q96NL0-5
0 19 1 50777.3359
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
bone marrow20
brain25
embryonic tissue4
eye28
intestine8
kidney4
liver14
mammary gland6
testis13
trachea38
uterus8
Health State
TissuesTPM*
normal8
breast (mammary gland) tumor10
germ cell tumor15
leukemia10
liver tumor20
primitive neuroectodermal tumor of the CNS7
uterine tumor22
Developmental Stage
TissuesTPM*
adult2
embryoid body14
fetus25
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue2
adrenal gland21.2
cerebral cortex13.9
colon3.8
duodenum5.7
esophagus2.1
gallbladder2.6
heart muscle2.2
kidney4.1
liver7.5
lung1.7
ovary2.8
prostate2.4
skin1.6
small intestine5.4
testis6.4
urinary bladder2.9
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected


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