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> Protein (NX_Q96NR8)
Protein (NX_Q96NR8)
Protein
Gene SymbolRDH12 to neXtProt (NX_Q96NR8)
DescriptionRetinol dehydrogenase 12
Chromosome14
Location14q24.1 (68168603 ~ 68201169) to Ensembl
Sequene Features : Isoforms 1, Variants 66, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.photoreceptor cell maintenance
.retinol metabolic process
.phototransduction, visible light
  + 2 more...
.retinol dehydrogenase activity .photoreceptor inner segment membrane
.intracellular
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
1 66 0
2014-09-19protein level
1 57 0
2014-05-27protein level
1 57 1
2014-02-25protein level
1 57 1
2013-12-09protein level
1 48 1
2013-11-01protein level
1 46 1
2013-09-12protein level
1 46 1
2013-08-17protein level
1 46 1
2013-07-15protein level
1 37 0
2013-06-11protein level
1 37 0
2013-02-12protein level
1 35 0
2012-12-20protein level
1 35 0
2012-10-30protein level
1 39 0
2012-10-07protein level
1 39 0
2012-08-24protein level
1 39 0
2012-07-28protein level
1 39 0
2012-06-08protein level
1 39 0
2012-05-07protein level
1 35 0
2012-04-10protein level
1 35 0
2012-01-13protein level
1 33 0
2011-12-20protein level
1 33 0
2011-11-11protein level
1 33 0
2011-08-23protein level
1 33 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96NR8-1
16 0 0 35071.4368
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-3916363,EBI-3390054 UBC  
  .programmed necrotic cell death
.apoptotic signaling pathway
.energy homeostasis
  + 90 more...
.poly(A) RNA binding
.protease binding
.extracellular exosome
.endocytic vesicle membrane
.endosome membrane
  + 3 more...
2 EBI-3916363,EBI-740322 RBPMS  
  .positive regulation of SMAD protein import into nucleus
.positive regulation of pathway-restricted SMAD protein phosphorylation
.RNA processing
  + 2 more...
.poly(A) RNA binding
.poly(A) binding
.transcription coactivator activity
.nucleotide binding
.cytoplasm
.nucleoplasm
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
brain9
esophagus49
eye124
kidney28
liver4
skin9
Health State
TissuesTPM*
normal11
kidney tumor29
skin tumor15
Developmental Stage
TissuesTPM*
adult11
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adrenal gland1.2
esophagus8.4
gallbladder20.3
kidney15.5
liver2.7
pancreas1.7
skin43
stomach11.9
thyroid gland1.8
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Disease
No.Disease DescriptionRef.
1(*608830, gene) Retinol dehydrogenase 12; RDH12OMIM
2(#612712, phenotype) Leber congenital amaurosis 13; LCA13OMIM


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