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> Protein (NX_Q96NZ9)
Protein (NX_Q96NZ9)
Protein
Gene SymbolPRAP1 to neXtProt (NX_Q96NZ9)
DescriptionProline-rich acidic protein 1
Chromosome10
Location10q26.3 (135160650 ~ 135166187) to Ensembl
Sequene Features : Isoforms 4, Variants 25, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.N/A .N/A .extracellular region
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
4 25 6
2014-09-19protein level
4 23 6
2014-05-27protein level
4 23 6
2014-02-25protein level
4 23 6
2013-12-09protein level
4 18 6
2013-11-01protein level
4 17 6
2013-09-12protein level
4 17 6
2013-08-17protein level
4 17 6
2013-07-15protein level
4 14 0
2013-06-11protein level
4 14 0
2013-02-12protein level
4 10 0
2012-12-20protein level
4 10 0
2012-10-30protein level
4 11 0
2012-10-07protein level
4 11 0
2012-08-24protein level
4 11 0
2012-07-28protein level
4 12 0
2012-06-08protein level
4 12 0
2012-05-07protein level
4 12 0
2012-04-10protein level
4 12 0
2012-01-13protein level
4 7 0
2011-12-20protein level
4 7 0
2011-11-11protein level
4 7 0
2011-08-23protein level
4 7 0
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96NZ9-1
0 7 0 17196.8296
NX_Q96NZ9-2
0 4 0 10252.6007
NX_Q96NZ9-3
1 6 0 17338.8782
NX_Q96NZ9-4
0 6 0 16321.3346
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
1 EBI-2116102,EBI-347996 SGTA  
  .viral process .N/A .cytoplasm
2 EBI-2116102,EBI-741480 UBQLN1  
  .regulation of autophagic vacuole assembly
.positive regulation of ER-associated ubiquitin-dependent protein catabolic process
.regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
  + 8 more...
.identical protein binding
.polyubiquitin binding
.kinase binding
.perinuclear region of cytoplasm
.protein complex
.aggresome
  + 6 more...
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
esophagus49
eye4
intestine30
kidney18
liver29
uterus4
Health State
TissuesTPM*
normal6
colorectal tumor8
esophageal tumor57
liver tumor20
uterine tumor11
Developmental Stage
TissuesTPM*
adult4
fetus14
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
appendix2.7
colon38.8
duodenum544.7
gallbladder1.7
kidney128.3
liver278.8
small intestine582.7
stomach1.3
testis6
Tissues
TissuesExpression level
duodenumMedium
kidneyMedium
liverMedium
small intestineMedium
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*609776, gene) Proline-rich acidic protein 1; PRAP1OMIM


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