Home| Contact Us

HOME SEARCH STATISTICS
> Protein (NX_Q96P16)
Protein (NX_Q96P16)
Protein
Gene SymbolRPRD1A to neXtProt (NX_Q96P16)
DescriptionRegulation of nuclear pre-mRNA domain-containing protein 1A
Chromosome18
Location18q12.2 (33564350 ~ 33647539) to Ensembl
Sequene Features : Isoforms 2, Variants 27, PTMsto neXtProt Sequence Features
Gene
Ontologies
GO: Biological Process GO: Mulecular Function GO: Cellular Component
.dephosphorylation of RNA polymerase II C-terminal domain .N/A .DNA-directed RNA polymerase II, holoenzyme
Proteomic Evidences
ReleaseProtein EvidencePrAbIsoformsVariantsPTMs
2015-01-01protein level
2 27 1
2014-09-19protein level
2 19 1
2014-05-27protein level
2 19 1
2014-02-25protein level
2 19 1
2013-12-09protein level
2 16 1
2013-11-01protein level
2 15 1
2013-09-12protein level
2 15 1
2013-08-17protein level
2 15 1
2013-07-15protein level
2 9 1
2013-06-11protein level
2 9 1
2013-02-12protein level
2 3 1
2012-12-20protein level
2 3 1
2012-10-30protein level
2 4 1
2012-10-07protein level
2 4 1
2012-08-24protein level
2 2 1
2012-07-28protein level
2 2 1
2012-06-08protein level
2 4 1
2012-05-07protein level
2 4 1
2012-04-10protein level
2 4 1
2012-01-13protein level
3 8 1
2011-12-20protein level
3 8 1
2011-11-11protein level
3 8 1
2011-08-23protein level
3 8 1
Protein Isoforms
Isoform Ac UGSMw (Da)
NX_Q96P16-1
2 11 2 35697.4644
NX_Q96P16-3
1 11 1 31605.1268
: Uniquely mapped peptide
: Gene-specific peptide
: Shared peptide
Interacting Partners
No. Exp. ref. Symbol   PE Pr Ab Di   GO: Biological Process GO: Mulecular Function GO: Cellular Component
EST expression level of Protein Coding Gene (ref. NCBI UniGene EST)
Body Sites
TissuesTPM*
adipose tissue77
adrenal gland273
ascites50
bladder234
blood24
bone111
bone marrow41
brain168
cervix103
connective tissue40
ear62
embryonic tissue56
esophagus148
eye129
heart89
intestine34
kidney90
liver48
lung92
lymph67
lymph node66
mammary gland112
mouth105
muscle56
nerve321
ovary39
pancreas14
parathyroid194
pituitary gland60
placenta42
prostate73
salivary gland98
skin66
spleen18
stomach41
testis110
thymus138
thyroid21
trachea135
uterus146
vascular96
Health State
TissuesTPM*
normal98
adrenal tumor237
bladder carcinoma227
breast (mammary gland) tumor96
cervical tumor57
chondrosarcoma108
colorectal tumor17
esophageal tumor173
gastrointestinal tumor33
germ cell tumor106
glioma18
head and neck tumor44
kidney tumor101
leukemia10
liver tumor41
lung tumor48
lymphoma69
non-neoplasia103
ovarian tumor39
pancreatic tumor9
primitive neuroectodermal tumor of the CNS31
prostate cancer77
retinoblastoma215
skin tumor23
soft tissue/muscle tissue tumor87
uterine tumor166
Developmental Stage
TissuesTPM*
adult73
embryoid body85
blastocyst32
neonate96
fetus122
infant42
juvenile107
TPM*: Transcripts per million; transcript expression level measured by expression sequence tags.
Expression level of Protein (ref. Human Protein Atlas)
RNA-Seq.
TissuesFPKM
adipose tissue21.3
adrenal gland38.1
appendix20.4
bone marrow9.7
cerebral cortex44.8
colon19.7
duodenum20.3
esophagus24.4
gallbladder21.7
heart muscle24.8
kidney25.2
liver12.4
lung20
lymph node21.4
ovary24.1
pancreas13.3
placenta21.2
prostate33
salivary gland23.9
skin18.6
small intestine18.8
spleen22.4
stomach21
testis46.8
thyroid gland36.9
urinary bladder26.2
Tissues
TissuesExpression level
adrenal glandHigh
appendixHigh
bone marrowLow
breastMedium
bronchusHigh
cerebellumHigh
cerebral cortexHigh
cervix, uterineHigh
colonHigh
duodenumHigh
endometrium 1High
endometrium 2High
epididymisHigh
esophagusHigh
fallopian tubeHigh
gallbladderHigh
heart muscleMedium
hippocampusHigh
kidneyHigh
lateral ventricleHigh
lungLow
lymph nodeMedium
oral mucosaHigh
ovaryMedium
pancreasHigh
parathyroid glandMedium
placentaLow
prostateHigh
rectumHigh
salivary glandHigh
seminal vesicleHigh
skeletal muscleHigh
skin 1High
skin 2High
small intestineHigh
smooth muscleMedium
soft tissue 1High
soft tissue 2Medium
stomach 1High
stomach 2High
testisHigh
thyroid glandHigh
tonsilHigh
urinary bladderHigh
vaginaHigh
Cancer
TumorNumber of patients and Staining levels
breast cancer
carcinoid
cervical cancer
colorectal cancer
endometrial cancer
glioma
head and neck cancer
liver cancer
lung cancer
lymphoma
melanoma
ovarian cancer
pancreatic cancer
prostate cancer
renal cancer
skin cancer
stomach cancer
testis cancer
thyroid cancer
urothelial cancer
RNA-seq colour codes
Highly expressed RNAs (FPKM >50)
Moderately expressed RNAs (50> FPKM >10)
Lower expressed RNAs (10> FPKM >1)
The lowest expressed RNAs (FPKM value of 0 or 1)
Expression level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Staining level colour codes
Highly expressed protein
Moderately expressed protein
Lower expressed protein
Not Detected
Disease
No.Disease DescriptionRef.
1(*610347, gene) Regulation of nuclear pre-mrna domain-containing protein 1a; RPRD1AOMIM


#424, YPRC/BPRC, Industry-University Research Center, Yonsei Univ., Seodaemun-gu, Seoul, Korea, 120-749
Tel: +82-2-2123-6626, Fax: +82-2-393-6589
2014-2019 (C) Yonsei Proteome Research Center